Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2117
(801 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 25 0.62
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 25 0.82
AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding prote... 23 3.3
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 23 4.4
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 22 5.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 5.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 5.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 7.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 7.6
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 25.4 bits (53), Expect = 0.62
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 747 RTCLRFINKVTVWCRLFLMICMDLSIQEIRLCFAY 643
R F+N +V+ R+F +ICM L I C +
Sbjct: 264 RKATLFLNMASVFMRIFNLICMMLLIGHWSGCLQF 298
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 25.0 bits (52), Expect = 0.82
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 732 FINKVTVWCRLFLMICMDLSIQEIRLCFAY 643
F+N +V+ R+F +ICM L I C +
Sbjct: 237 FLNMASVFMRIFNLICMMLLIGHWSGCLQF 266
>AF393497-1|AAL60422.1| 143|Apis mellifera odorant binding protein
ASP5 protein.
Length = 143
Score = 23.0 bits (47), Expect = 3.3
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +3
Query: 627 YVRCHHKQN 653
YV+CH+KQN
Sbjct: 128 YVQCHYKQN 136
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 22.6 bits (46), Expect = 4.4
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 400 QAFHH*NCYSGLNPTSLKV*TLS 468
Q FHH +S NP +++ T S
Sbjct: 11 QQFHHQQLFSSANPGTIQACTTS 33
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.8
Identities = 9/32 (28%), Positives = 17/32 (53%)
Frame = +1
Query: 7 YPKHTITNSNSFLRYKTISLNILKHIPWSHAP 102
YP + + ++FL KT + + +P+S P
Sbjct: 454 YPNPDVFDPDNFLPEKTANRHYYAFVPFSAGP 485
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.8
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Frame = +3
Query: 195 EVMKQLERLFGIK-HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAML 371
E+ L ++ IK H + + G + ++T LRS QHT Y R
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
Query: 372 AYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIE 551
+ + N E L K K ++ R +LY ++++ + E
Sbjct: 238 SRDRNREYRKKDRQYEKLHNEKE---KFLEERTSRKRYSRSREREQKLYKNKREYRKYRE 294
Query: 552 SSKERSK 572
+SKERS+
Sbjct: 295 TSKERSR 301
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 22.2 bits (45), Expect = 5.8
Identities = 29/127 (22%), Positives = 49/127 (38%), Gaps = 1/127 (0%)
Frame = +3
Query: 195 EVMKQLERLFGIK-HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDLYLRTAML 371
E+ L ++ IK H + + G + ++T LRS QHT Y R
Sbjct: 178 EIKNVLTKINKIKEHDTVLVVNIEKSGNESKKYATSSNSLRSRTHGFQHTSSRYSRERSC 237
Query: 372 AYNSNIHSTTGFSPLELLFGFKPYIPKSIDSLDLNTYSDYIRALNHRLYYSRQKALQNIE 551
+ + N E L K K ++ R +LY ++++ + E
Sbjct: 238 SRDRNREYRKKDRQYEKLHNEKE---KFLEERTSRKRYSRSREREQKLYKNKREYRKYRE 294
Query: 552 SSKERSK 572
+SKERS+
Sbjct: 295 TSKERSR 301
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 7.6
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +3
Query: 504 NHRLYYSRQKALQNIESSKERSKKYYDSHSKPITYNIGDMVYVRCHHKQNKAL 662
++R Y K + +ERSK+ S YN + Y ++ NK L
Sbjct: 288 SYRKYRETSKERSRDRTERERSKERKIISSLSNNYNYNNNNYKYNYNNYNKKL 340
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 7.6
Identities = 11/39 (28%), Positives = 17/39 (43%)
Frame = +3
Query: 234 HIFASPYHPQTCGALERSHSTLKEYLRSYIVENQHTWDL 350
H PY + CG LK + R++ E +T D+
Sbjct: 198 HTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDI 236
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,697
Number of Sequences: 438
Number of extensions: 4603
Number of successful extensions: 29
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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