Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2116
         (740 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A5FF60 Cluster: Putative uncharacterized protein; n=1; ...    35   1.8  

>UniRef50_A5FF60 Cluster: Putative uncharacterized protein; n=1;
           Flavobacterium johnsoniae UW101|Rep: Putative
           uncharacterized protein - Flavobacterium johnsoniae
           UW101
          Length = 1233

 Score = 35.1 bits (77), Expect = 1.8
 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -1

Query: 503 VPIV-YSCNWSVLQARIPRQMLLLKLSPTFIDPVSL*FLGDFAVISFRRSIWNYYRL 336
           +P++ Y+ + S L +++   +L  KLS  FID VSL FL D+  I   +SI+N Y++
Sbjct: 329 IPVINYTSSSSKLLSKLKEDILSNKLSKDFIDDVSL-FLNDYRTI---KSIFNEYQI 381


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 701,947,330
Number of Sequences: 1657284
Number of extensions: 13841618
Number of successful extensions: 26166
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 25307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26159
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)