Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2115
         (397 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089468-1|AAL90206.1|  462|Drosophila melanogaster AT27896p pro...    29   1.7  
AE014296-1121|AAF50659.1|  462|Drosophila melanogaster CG32396-P...    29   1.7  
AF467953-1|AAL76078.1|  426|Drosophila melanogaster histamine-ga...    29   3.0  
AY113303-1|AAM29308.1|  246|Drosophila melanogaster AT26603p pro...    27   9.0  
AE014297-2710|AAN13810.1|  246|Drosophila melanogaster CG31459-P...    27   9.0  

>AY089468-1|AAL90206.1|  462|Drosophila melanogaster AT27896p
           protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 169 NNVHVHTCTITTRDLRKNDQNINQTTQFETLYQNLI 62
           NN+    C I  R L+ +   I  TT  +TL+Q L+
Sbjct: 346 NNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLL 381


>AE014296-1121|AAF50659.1|  462|Drosophila melanogaster CG32396-PA
           protein.
          Length = 462

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -1

Query: 169 NNVHVHTCTITTRDLRKNDQNINQTTQFETLYQNLI 62
           NN+    C I  R L+ +   I  TT  +TL+Q L+
Sbjct: 346 NNIKTAICDIPPRGLKMSATFIGNTTAIQTLFQRLL 381


>AF467953-1|AAL76078.1|  426|Drosophila melanogaster histamine-gated
           chloride channelsubunit protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = -3

Query: 212 VVLGINARQTRHFIEQCSRAHVYYNNTRFAEKRPEHQSNYTI*NAISEPN 63
           + L I  R     I+ C   H Y NNT  AE    ++S+ ++ + +  P+
Sbjct: 15  IALAIYLRALEQSIQHCHCVHGYRNNTESAELVSHYESSLSLPDILPIPS 64


>AY113303-1|AAM29308.1|  246|Drosophila melanogaster AT26603p
           protein.
          Length = 246

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 390 VDNHYRFMRRIYDRK*QTLRSKYEVFXRSLKIYHQRRRLLKAI 262
           +DN Y  +RR +  + Q    KY  +    K+  +RRR+ K+I
Sbjct: 10  MDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCKSI 52


>AE014297-2710|AAN13810.1|  246|Drosophila melanogaster CG31459-PA
           protein.
          Length = 246

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = -2

Query: 390 VDNHYRFMRRIYDRK*QTLRSKYEVFXRSLKIYHQRRRLLKAI 262
           +DN Y  +RR +  + Q    KY  +    K+  +RRR+ K+I
Sbjct: 10  MDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCKSI 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,804,844
Number of Sequences: 53049
Number of extensions: 260937
Number of successful extensions: 501
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1128794130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)