Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2113
(562 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 87 2e-18
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 83 3e-17
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 76 3e-15
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 76 3e-15
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 75 9e-15
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 72 5e-14
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 71 9e-14
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 63 3e-11
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 49 5e-07
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 47 2e-06
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 38 0.001
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 35 0.009
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 33 0.022
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 30 0.20
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.27
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 29 0.47
SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|... 28 0.82
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 26 3.3
SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 4.4
SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomy... 26 4.4
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 26 4.4
SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual 25 5.8
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.8
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 25 5.8
SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces pom... 25 5.8
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 25 5.8
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 87.0 bits (206), Expect = 2e-18
Identities = 44/103 (42%), Positives = 65/103 (63%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 355
MA K +LKVI+ GE GVGK+S+ +++N F + D +AT+G D K V DK V
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKF--SKDYKATIGADFLTKEVLVDDKVVT 58
Query: 356 LQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
LQLWDT G ER S+ ++Y+ A+ +LV+ ++N+ SF L +
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDS 101
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 83.0 bits (196), Expect = 3e-17
Identities = 43/115 (37%), Positives = 70/115 (60%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 355
M+ K LKV++ G+ GVGK+ L +F+N F + + +AT+G D K V DK V
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKF--SREYKATIGADFLTKDVVVDDKLVT 58
Query: 356 LQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKTQ 520
LQLWDT G ER S+ ++Y+ A+ ++V+ ++N+ SF + N + + +L Q +Q
Sbjct: 59 LQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVEN-WRQEFLYQTSQ 112
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 76.2 bits (179), Expect = 3e-15
Identities = 36/92 (39%), Positives = 60/92 (65%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K++L G+ GVGKS L RF ++T+ + +T+G+D + +++ K VKLQ+WDT
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYI--STIGVDFKIRTFELEGKTVKLQIWDTA 65
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFH 472
G ER ++TSSYY+ A I+V+ + + SF+
Sbjct: 66 GQERFRTITSSYYRGAHGIIIVYDVTDQDSFN 97
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 76.2 bits (179), Expect = 3e-15
Identities = 35/91 (38%), Positives = 58/91 (63%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K +L G+ GVGKS+L RF N F N + ++T+G++ + + +K +K Q+WDT
Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEF--NIESKSTIGVEFATRNIVLDNKKIKAQIWDTA 67
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G ER ++TS+YY+ A A++V+ + SSF
Sbjct: 68 GQERYRAITSAYYRGAVGALIVYDITKQSSF 98
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 74.5 bits (175), Expect = 9e-15
Identities = 36/89 (40%), Positives = 56/89 (62%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
K++ GE VGK+SL RF+ + F ++ +AT+G+D K + D+ V+LQLWDT G
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 70
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSF 469
ER S+ SY + + AI+V+ + N +SF
Sbjct: 71 ERFRSLIPSYIRDSSVAIIVYDITNHNSF 99
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 72.1 bits (169), Expect = 5e-14
Identities = 37/100 (37%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVA----DKDVKLQL 364
++K++L G G GKS L +RF+ N + + T+G+D ++ V K +KLQ+
Sbjct: 9 LVKIVLAGPSGTGKSCLLQRFVKNQW--DDQVSHTVGIDFASRIISVGMGNQQKRIKLQI 66
Query: 365 WDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
WDT G E+ SV +YY+ A A+LV+ + N SF LS+
Sbjct: 67 WDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSS 106
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 71.3 bits (167), Expect = 9e-14
Identities = 33/91 (36%), Positives = 58/91 (63%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
++K++L G+ GVGKS L RF ++F P+ T+G+D + ++ K +KLQ+WDT
Sbjct: 9 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFI--TTIGIDFKIRTIELDGKRIKLQIWDTA 66
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G ER ++T++YY+ A +L++ + + SF
Sbjct: 67 GQERFRTITTAYYRGAMGILLLYDVTDKKSF 97
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 62.9 bits (146), Expect = 3e-11
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADK-DVKLQLWDTGG 379
K++L G+ VGKSSL RF+ + F + R +T+G + + + VKL++WDT G
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQF--DDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAG 73
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASS 466
ER S+ YY+ A AI+V+ + A+S
Sbjct: 74 QERYKSLAPMYYRNANCAIVVYDITQAAS 102
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 48.8 bits (111), Expect = 5e-07
Identities = 26/106 (24%), Positives = 50/106 (47%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+KV + G+ +GK+SL ++ +F S + TLG++ EK + + ++ +WD GG
Sbjct: 11 IKVGMIGDSSIGKTSLMVTYVQGSFDEESTQ--TLGVNFMEKTISIRNTEITFSIWDLGG 68
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKT 517
++ A A + +F L S+ + + Y + KT
Sbjct: 69 QREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGFNKT 114
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 47.2 bits (107), Expect = 2e-06
Identities = 22/84 (26%), Positives = 41/84 (48%)
Frame = +2
Query: 194 PVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDT 373
P K++L G+ G GK++ +R + F ATLG++ + ++ +WDT
Sbjct: 8 PTFKLVLVGDGGTGKTTFVKRHLTGEF--EKKYIATLGVEVHPLHFHTNFGEICFNVWDT 65
Query: 374 GGMERIASVTSSYYKFAEAAILVF 445
G E++ + YY + I++F
Sbjct: 66 AGQEKLGGLRDGYYIQGQCGIIMF 89
Score = 26.2 bits (55), Expect = 3.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 493 EIVSYAENAKIFLCGNKYDLE 555
++V EN I LCGNK D++
Sbjct: 106 DLVRVCENIPIVLCGNKVDVK 126
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 37.5 bits (83), Expect = 0.001
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRR--ATLGLDHFEKLYQVADKDVKLQLWDTG 376
KV+L G G GKSS+ R + + +V RR AT+ ++H + ++ L LWD G
Sbjct: 4 KVLLMGRSGSGKSSM-RSIVFSNYVAKDTRRLGATIDIEHSHVRFL---GNLVLNLWDCG 59
Query: 377 GMERIASVTSSYYK---FAEAAILVFLLD 454
G E S + F +L+++ D
Sbjct: 60 GQEAFMENYLSAQRDHIFRNVQVLIYVFD 88
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 34.7 bits (76), Expect = 0.009
Identities = 27/108 (25%), Positives = 53/108 (49%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 355
MA +K+ + V+ G VGKSSL +++ N FV T+ + F K + ++
Sbjct: 1 MAPIKSRRIAVL--GSRSVGKSSLTVQYVENHFV--ESYYPTIE-NTFSKNIKYKGQEFA 55
Query: 356 LQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKL 499
++ DT G + + + S + +LV+ + + SSF ++ + K+
Sbjct: 56 TEIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKI 103
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 33.5 bits (73), Expect = 0.022
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +2
Query: 335 VADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHI 475
V K++K +WD GG ++I + Y+ + L+F++D+A S I
Sbjct: 60 VTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKG--LIFVVDSADSNRI 104
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 30.3 bits (65), Expect = 0.20
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%)
Frame = +2
Query: 164 KRQNMAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSD---RRATLGLDHFE--KL 328
KR+N+ K L ++LCG G GK++ F + P + T+ E K
Sbjct: 19 KRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEVKKN 78
Query: 329 YQVADKD---VKLQLWDTGGMERIASVTSSYYKFAE 427
V ++D + L + DT G TS + AE
Sbjct: 79 KAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAE 114
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 29.9 bits (64), Expect = 0.27
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFI---NNTFVP 280
++V++CG+ GVGKSSL I N T +P
Sbjct: 4 VRVVICGDQGVGKSSLISALIQEDNVTSIP 33
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 29.1 bits (62), Expect = 0.47
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +2
Query: 185 VKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQL 364
+K ++V+L G GK+++ + +N ++ T G ++ + + ++ +
Sbjct: 12 LKEREVRVLLLGLDNAGKTTILKCLLNEDV---NEVSPTFGF----QIRTLEVEGLRFTI 64
Query: 365 WDTGGMERIASVTSSYYKFAEAAILV 442
WD GG + + + +Y++ EA I V
Sbjct: 65 WDIGGQKTLRNFWKNYFESTEAIIWV 90
>SPCC830.03 |||AAA family ATPase Grc3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 28.3 bits (60), Expect = 0.82
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLD 313
V ++++CG G GKSS F R+I N + A L LD
Sbjct: 331 VPRLMVCGPKGSGKSS-FSRYITNRLLQQYRHIAYLDLD 368
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 26.2 bits (55), Expect = 3.3
Identities = 8/33 (24%), Positives = 18/33 (54%)
Frame = +2
Query: 344 KDVKLQLWDTGGMERIASVTSSYYKFAEAAILV 442
+++ +WD GG ++I + Y++ + I V
Sbjct: 59 RNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFV 91
>SPAC22H10.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 646
Score = 25.8 bits (54), Expect = 4.4
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 440 VFLLDNASSFHILSNIYLKLYLMQKTQRYFYVEINMIWKEH 562
+FLL+ S ++L+N Y++ R + EIN W+EH
Sbjct: 412 LFLLNCYSLLNVLAN-----YVVVFKDRLIFQEINQNWEEH 447
>SPAPB24D3.02c |||amino acid permease, unknown 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 543
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -2
Query: 240 LFPTPYSPHKITFNTGVFTTAIFCLFFTINYF 145
LFP+ +P+K+ N + F +FF + Y+
Sbjct: 468 LFPSYQNPNKVEMNWAIVVLG-FTVFFCVGYY 498
>SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1466
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 322 EVVPSCGQRCQVAVMGYWRYGKNSFXD 402
++VP CG+ C + + GY +N F D
Sbjct: 1058 KIVPKCGKNCYLHLHGYTE--RNQFSD 1082
>SPCC613.07 |||zf-HIT|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 236 KSSLFRRFINNTFVPNSDRRATLGLDHFEK 325
K SL R IN F P S+++ L H++K
Sbjct: 98 KRSLERAGINIKFAPPSNKKRRLNRTHYDK 127
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.4 bits (53), Expect = 5.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 234 ERVHYFAGSLTIPLFQTLIE 293
ER+H+F + IP FQ +++
Sbjct: 139 ERIHFFIVDVLIPFFQRVVQ 158
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 212 LCGEYGVGKSSLFRRFIN 265
LCG G GKS+L R +N
Sbjct: 465 LCGPNGSGKSTLMRAIVN 482
>SPBC1604.17c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -3
Query: 215 TKLLSIQEFLQQPYFVSFLLLIISVARH*LRNTFYKYHN 99
TKLL I + + V L+ ++ +R+ +R ++HN
Sbjct: 382 TKLLEIYSYRISAHHVELLMALVVCSRNYMRCNLQEHHN 420
>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
Trr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 295 GDFRFRSFREVVPSCGQRCQVAVM 366
GD + + FR+ + S G CQ A++
Sbjct: 287 GDVQDKVFRQAITSAGSGCQAALL 310
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,332,533
Number of Sequences: 5004
Number of extensions: 47100
Number of successful extensions: 173
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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