Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2113
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            71   3e-14
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    31   0.020
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   1.3  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   3.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.0  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    24   3.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   9.0  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 70.5 bits (165), Expect = 3e-14
 Identities = 35/89 (39%), Positives = 53/89 (59%)
 Frame = +2

Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
           K++L GE  VGKSSL  RF+   F  +  + +T+G     +   + D  VK ++WDT G 
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQ 83

Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSF 469
           ER  S+   YY+ A+AAI+V+ + N+ SF
Sbjct: 84  ERYHSLAPMYYRGAQAAIVVYDIQNSDSF 112


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 31.5 bits (68), Expect = 0.020
 Identities = 20/90 (22%), Positives = 38/90 (42%)
 Frame = +2

Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
           +K ++ G+  VGK+ +   +  ++F            D++     V    V L LWDT G
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSF---PGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAG 63

Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSF 469
            E    +    Y   +  ++ + + + SSF
Sbjct: 64  QEDYDRLRPLSYPQTDVFLICYSVASPSSF 93


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 335 VADKDVKLQLWDTGGMERIASVTSSYYKFAE 427
           VADK     +W TG ++R+ S T   +  AE
Sbjct: 46  VADKTGNAAIWVTGTIQRVVSNTFEGFCIAE 76


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 437 LVFLLDNASSFHILSNIYLK 496
           L FL+  A S + +SN+Y+K
Sbjct: 66  LTFLVVTACSIYFISNVYIK 85


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +2

Query: 437 LVFLLDNASSFHILSNIYLK 496
           L FL+  A S + +SN+Y+K
Sbjct: 66  LTFLVVTACSIYFISNVYIK 85


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.8 bits (49), Expect = 3.9
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 310 RSFREVVPSCGQRCQVAVMGYWRYGKNSFXD 402
           +SF   +  C +  QV    Y  Y  NSF D
Sbjct: 39  KSFSRALQDCMEYLQVPGYRYAEYAANSFPD 69


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +1

Query: 301 FRFRSFREVVPSCGQRCQVAVMGYWRYGKNSFXDIKLL*IC*SCNFGLFTGQCF 462
           F F S   V P C   C+V   G W  G ++      L    +C+     G+CF
Sbjct: 148 FNFSSPERVCPPCHPSCEV---GCWGEGAHNCQRFSKL----NCSPQCSQGRCF 194


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 567,509
Number of Sequences: 2352
Number of extensions: 10486
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)