Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2113
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 83 1e-16
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 83 1e-16
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 81 4e-16
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 81 5e-16
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 79 2e-15
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 79 3e-15
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 78 4e-15
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 78 4e-15
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 77 9e-15
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 76 2e-14
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 76 2e-14
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 76 2e-14
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 75 3e-14
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 75 4e-14
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 75 5e-14
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 75 5e-14
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 75 5e-14
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 75 5e-14
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 73 1e-13
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 73 2e-13
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 73 2e-13
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 71 8e-13
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 70 1e-12
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 69 2e-12
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 69 2e-12
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 68 5e-12
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 68 5e-12
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 68 5e-12
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 68 5e-12
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 68 5e-12
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 68 5e-12
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 64 5e-11
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 61 6e-10
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 60 8e-10
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 60 8e-10
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 60 8e-10
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 60 8e-10
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 56 2e-08
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 55 3e-08
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 55 4e-08
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 52 3e-07
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 50 9e-07
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 50 1e-06
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 50 1e-06
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 50 2e-06
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 49 3e-06
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 48 5e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 47 8e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 47 8e-06
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 47 8e-06
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 46 2e-05
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 42 2e-04
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 40 0.001
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.001
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 40 0.001
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 40 0.001
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 40 0.001
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 38 0.005
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 37 0.011
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 37 0.011
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 37 0.011
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 36 0.026
Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical pr... 35 0.035
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 35 0.035
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 34 0.061
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 34 0.061
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 34 0.080
Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 32 0.25
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 32 0.25
AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical ... 32 0.25
AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical ... 32 0.25
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 32 0.25
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 32 0.32
Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.43
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 31 0.43
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 31 0.43
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 31 0.57
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z83319-4|CAB05909.1| 734|Caenorhabditis elegans Hypothetical pr... 30 0.99
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 30 0.99
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 30 0.99
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 29 2.3
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 29 2.3
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 28 4.0
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 28 4.0
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 28 4.0
AC006830-8|ABA00186.1| 289|Caenorhabditis elegans Hypothetical ... 28 4.0
U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical pr... 28 5.3
U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal mem... 27 7.0
U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal mem... 27 7.0
AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeri... 27 9.2
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 27 9.2
AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, al... 27 9.2
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/95 (44%), Positives = 63/95 (66%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
LKV+L G+ GK+ L R+ + F+ N++ +T+G+D+ KL + DK VKLQ+WDT G
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFL-NNNFISTVGIDYRNKLITMGDKKVKLQIWDTAG 61
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
ER SVT+SYY+ A+A +LV+ + N +SF N
Sbjct: 62 QERFRSVTTSYYRDADALLLVYDIANRASFENCRN 96
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/95 (44%), Positives = 63/95 (66%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
LKV+L G+ GK+ L R+ + F+ N++ +T+G+D+ KL + DK VKLQ+WDT G
Sbjct: 3 LKVMLLGDSCTGKTCLLIRYKDGAFL-NNNFISTVGIDYRNKLITMGDKKVKLQIWDTAG 61
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
ER SVT+SYY+ A+A +LV+ + N +SF N
Sbjct: 62 QERFRSVTTSYYRDADALLLVYDIANRASFENCRN 96
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/112 (36%), Positives = 69/112 (61%)
Frame = +2
Query: 188 KTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLW 367
K +LKVI+ G+ GVGK+SL +++N F ++ +AT+G D + + D+ V LQ+W
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYVNRRF--SNQYKATIGADFLTRDVNIDDRTVTLQIW 63
Query: 368 DTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKTQR 523
DT G ER S+ ++Y+ A+ +L F + NA+SF L + + +L+Q + R
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDS-WRDEFLIQASPR 114
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 81.0 bits (191), Expect = 5e-16
Identities = 40/94 (42%), Positives = 55/94 (58%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ KV+L G GVGK+ L R+F F P AT+G+D K +V + +KLQ+WDT
Sbjct: 7 LFKVVLVGNAGVGKTCLVRKFTQGIFPPGQS--ATIGVDFMIKTVKVGNDKIKLQIWDTA 64
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHIL 478
G ER S+T SYY+ A A +LV+ + SF L
Sbjct: 65 GQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCL 98
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 79.0 bits (186), Expect = 2e-15
Identities = 35/90 (38%), Positives = 59/90 (65%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
K++ GE VGK+S+ RF+ ++F ++ +AT+G+D K + D+ ++LQLWDT G
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQ 70
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFH 472
ER S+ SY + + A++V+ + NA+SFH
Sbjct: 71 ERFRSLIPSYIRDSSVAVVVYDITNANSFH 100
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 78.6 bits (185), Expect = 3e-15
Identities = 36/90 (40%), Positives = 59/90 (65%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
K++ GE VGK+SL RF+ ++F ++ +AT+G+D K + D+ V+LQLWDT G
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQ 69
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFH 472
ER S+ SY + + A++V+ + N++SFH
Sbjct: 70 ERFRSLIPSYIRDSTVAVVVYDITNSNSFH 99
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 78.2 bits (184), Expect = 4e-15
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRAT-LGLDHFEKLYQVADKDVKLQLWDT 373
+ K++L G+ GVGK+ + +RF N TFV DR+ T +G+D K V K VKLQ+WDT
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFV---DRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 374 GGMERIASVTSSYYKFAEAAILVFLLDNASSF 469
GG ER ++T SYY+ A +L + + SF
Sbjct: 67 GGQERFRTITQSYYRSANGIVLCYDITCKQSF 98
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 78.2 bits (184), Expect = 4e-15
Identities = 39/95 (41%), Positives = 60/95 (63%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
LK+++ GE GVGKSSL RF+++ F P ++ AT+G+D + VKL +WDT G
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDP--EQAATIGVDFRVTSMAIDGNRVKLAIWDTAG 69
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
ER ++T SYY+ A+ I V+ + + SSF L++
Sbjct: 70 QERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH 104
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 77.0 bits (181), Expect = 9e-15
Identities = 36/83 (43%), Positives = 54/83 (65%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ KV+L G+ GVGKS+L RF N F N + ++T+G++ + V K VK Q+WDT
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEF--NLESKSTIGVEFATRSISVEGKTVKAQIWDTA 68
Query: 377 GMERIASVTSSYYKFAEAAILVF 445
G ER ++TS+YY+ A A+LV+
Sbjct: 69 GQERYRAITSAYYRGAVGALLVY 91
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 76.2 bits (179), Expect = 2e-14
Identities = 36/91 (39%), Positives = 56/91 (61%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G+ GVGKSSL RF +NTF N T+G+D + + + VKLQ+WDT
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYI--TTIGVDFKIRTMDINGQRVKLQIWDTA 67
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G ER ++TS+YY+ ++V+ + N SF
Sbjct: 68 GQERFRTITSTYYRGTHGVVVVYDVTNGESF 98
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K++L G+ GVGK+ + RF ++ F N+ +T+G+D K ++ K +KLQ+WDT
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAF--NTTFISTIGIDFKIKTIELKGKKIKLQIWDTA 66
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G ER ++T+SYY+ A +LV+ + NA SF
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSF 97
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K++L G+ GVGK+ + RF ++ F N+ +T+G+D K ++ K +KLQ+WDT
Sbjct: 9 LFKLLLIGDSGVGKTCILYRFSDDAF--NTTFISTIGIDFKIKTIELKGKKIKLQIWDTA 66
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G ER ++T+SYY+ A +LV+ + NA SF
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSF 97
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/96 (36%), Positives = 61/96 (63%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K I+ G+ GVGKS L +F F+ +D T+G++ ++ +V+ + +KLQ+WDT
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFM--ADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA 68
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
G ER +VT SYY+ A A++V+ + S+++ LS+
Sbjct: 69 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSS 104
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 74.9 bits (176), Expect = 4e-14
Identities = 35/83 (42%), Positives = 54/83 (65%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ KV+L G+ GVGKS+L RF N F + + ++T+G++ + V K VK Q+WDT
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEF--HLESKSTIGVEFATRSISVEGKTVKAQIWDTA 68
Query: 377 GMERIASVTSSYYKFAEAAILVF 445
G ER ++TS+YY+ A A+LV+
Sbjct: 69 GQERYRAITSAYYRGAVGALLVY 91
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/83 (44%), Positives = 51/83 (61%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K++L G GVGKS+L RF N F N + T+G++ K+ V K VK+Q+WDT
Sbjct: 8 LFKIVLIGNPGVGKSNLLSRFTRNEF--NLKSKPTIGVEFATKIISVEGKAVKVQIWDTA 65
Query: 377 GMERIASVTSSYYKFAEAAILVF 445
GMER SSYY+ A A+LV+
Sbjct: 66 GMERFRCGASSYYRGALGALLVY 88
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/103 (35%), Positives = 63/103 (61%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 355
MA + K++L G+ GVGK+ + RF +++F N+ +T+G+D + ++ K +K
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSF--NNSFISTIGIDFKIRTIELDGKKIK 58
Query: 356 LQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
LQ+WDT G ER ++T++YY+ A ILV+ + N SF + N
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN 101
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/103 (35%), Positives = 63/103 (61%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 355
MA + K++L G+ GVGK+ + RF +++F N+ +T+G+D + ++ K +K
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSF--NNSFISTIGIDFKIRTIELDGKKIK 58
Query: 356 LQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
LQ+WDT G ER ++T++YY+ A ILV+ + N SF + N
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN 101
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 74.5 bits (175), Expect = 5e-14
Identities = 37/103 (35%), Positives = 63/103 (61%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVK 355
MA + K++L G+ GVGK+ + RF +++F N+ +T+G+D + ++ K +K
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSF--NNSFISTIGIDFKIRTIELDGKKIK 58
Query: 356 LQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
LQ+WDT G ER ++T++YY+ A ILV+ + N SF + N
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN 101
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 73.3 bits (172), Expect = 1e-13
Identities = 35/100 (35%), Positives = 57/100 (57%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G++ GKS + RF N+F D +TLG+D K ++ ++L+LWDT
Sbjct: 6 LFKIVVVGDHNCGKSCILLRFAENSF--RMDHISTLGVDFKLKTIKLGRDKIRLELWDTA 63
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLK 496
GMER ++ +SYY A + V+ + N SF L +LK
Sbjct: 64 GMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLK 103
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/96 (39%), Positives = 58/96 (60%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
V K ++ G+ GVGKS+L RFI F +S +TLG++ + ++ K VKL +WDT
Sbjct: 6 VFKYVIIGDRGVGKSNLLLRFIGKPF--DSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTC 63
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
G ER S+ SYY+ A A+LV+ + + SF+ L +
Sbjct: 64 GQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEH 99
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 72.5 bits (170), Expect = 2e-13
Identities = 35/96 (36%), Positives = 57/96 (59%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K I+ G+ GVGKS L +F + F P D T+G++ ++ + K +KLQ+WDT
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMVTIDGKQIKLQIWDTA 63
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
G E S+T SYY+ A A+LV+ + +F+ L++
Sbjct: 64 GQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS 99
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 72.5 bits (170), Expect = 2e-13
Identities = 34/92 (36%), Positives = 59/92 (64%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K++L G+ GVGKS L RF ++T+ + +T+G+D + ++ K +KLQ+WDT
Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYI--STIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFH 472
G ER ++TSSYY+ A I+V+ + + +F+
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDITDQETFN 100
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 70.5 bits (165), Expect = 8e-13
Identities = 36/89 (40%), Positives = 52/89 (58%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
++++CG+ VGKSS R I F + +TLG+D K V ++V LQLWDT G
Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQFT--NQLPSTLGVDFHVKTVNVDGRNVALQLWDTAGQ 520
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSF 469
ER S+ SY++ A+ AILV+ + SF
Sbjct: 521 ERFRSLCKSYFRRADGAILVYDVCAEQSF 549
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 70.1 bits (164), Expect = 1e-12
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +2
Query: 176 MAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVAD-KDV 352
M +KT +KV++ GE G GK++L F++NTF +D T+G+D K+ Q+ D + +
Sbjct: 1 MDTIKT--VKVVVVGESGAGKTALLTCFLDNTF--ETDPLTTIGIDFKHKIVQLNDGQSI 56
Query: 353 KLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDN 457
+LQLWDT G ER + +Y + A A+LV L +
Sbjct: 57 RLQLWDTAGQERFRQLAPAYIRSARVALLVIDLSD 91
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 69.7 bits (163), Expect = 1e-12
Identities = 36/99 (36%), Positives = 55/99 (55%)
Frame = +2
Query: 188 KTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLW 367
+T K++L GE VGKSSL RF+ F + + +T+G + + D +K ++W
Sbjct: 16 RTCQFKLVLLGESAVGKSSLVLRFVKGQF--HEYQESTIGAAFLTQTVCLDDATIKFEIW 73
Query: 368 DTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
DT G ER S+ YY+ A+AAI+V+ + N SF N
Sbjct: 74 DTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKN 112
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 69.3 bits (162), Expect = 2e-12
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDV-KLQLWDTGG 379
KV++ G+ GVGK+S+ RRF++N F +S+ + T+G+D K+ V + V LQ+WD G
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVF--SSNYKTTIGVDFALKILPVDENTVVHLQIWDISG 70
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQK 514
+R +T YYK A AAI+V LD+ I + K L QK
Sbjct: 71 QDRYGVMTRVYYKDAHAAIIV--LDSTRERTIEGALRWKTDLDQK 113
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 69.3 bits (162), Expect = 2e-12
Identities = 42/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDV-KLQLWDTGG 379
KV++ G+ GVGK+S+ RRF++N F +S+ + T+G+D K+ V + V LQ+WD G
Sbjct: 13 KVLVIGDPGVGKTSIIRRFVHNVF--SSNYKTTIGVDFALKILPVDENTVVHLQIWDISG 70
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQK 514
+R +T YYK A AAI+V LD+ I + K L QK
Sbjct: 71 QDRYGVMTRVYYKDAHAAIIV--LDSTRERTIEGALRWKTDLDQK 113
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTA 79
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN--IYLKLYLMQKTQ 520
G ER ++T++YY+ A IL++ + N SF+ + + +K Y + Q
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQ 129
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTA 79
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN--IYLKLYLMQKTQ 520
G ER ++T++YY+ A IL++ + N SF+ + + +K Y + Q
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQ 129
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTA 79
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN--IYLKLYLMQKTQ 520
G ER ++T++YY+ A IL++ + N SF+ + + +K Y + Q
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQ 129
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT
Sbjct: 36 MFKLLIIGNSSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTA 93
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN--IYLKLYLMQKTQ 520
G ER ++T++YY+ A IL++ + N SF+ + + +K Y + Q
Sbjct: 94 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQ 143
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 67.7 bits (158), Expect = 5e-12
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Frame = +2
Query: 128 VNVLRQK*LIVKKRQNMAVVKTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLG 307
+N + +K L ++ + + KV+ G+ VGK+ RF +N F P + AT+G
Sbjct: 179 LNAIGKKVLQKEEIEEEVTQPDRIFKVVFVGDSAVGKTCFLHRFCHNRFKPLFN--ATIG 236
Query: 308 LDHFEKLYQVA-DKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSF 469
+D K ++ ++ + +QLWDT G ER S+T Y++ A+ +L+F + + SF
Sbjct: 237 VDFTVKTMKIPPNRAIAMQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSF 291
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 67.7 bits (158), Expect = 5e-12
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K+++ G VGK+S R+ +++F S +T+G+D K DK VKLQ+WDT
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFT--SAFVSTVGIDFKVKTVFRGDKRVKLQIWDTA 79
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN--IYLKLYLMQKTQ 520
G ER ++T++YY+ A IL++ + N SF+ + + +K Y + Q
Sbjct: 80 GQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQ 129
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 64.5 bits (150), Expect = 5e-11
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADK-DVKLQLWDTGG 379
++I+ G+ VGKSSL R F SD T+G+D + ++ ++ VKLQLWDT G
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISD--PTVGVDFYARMIELRPGYRVKLQLWDTAG 76
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
E+ S+T SYY+ + + ++ N SF + N
Sbjct: 77 QEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVEN 111
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 60.9 bits (141), Expect = 6e-10
Identities = 32/96 (33%), Positives = 55/96 (57%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
K+++ G GVGKS+L +++ FV D AT+ D + KL +V ++ +L++ DT G
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYD--ATIE-DSYRKLSKVDAENARLEILDTAGT 61
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIY 490
E+ + +YY+ A+ +LVF L S+F L +
Sbjct: 62 EQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTF 97
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 60.5 bits (140), Expect = 8e-10
Identities = 33/91 (36%), Positives = 51/91 (56%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K ++ G+ GVGKS+L RF + F P TLG++ K Q+ V+L++WDT
Sbjct: 6 MFKYVIIGDGGVGKSNLLLRFTDELFDPI--HTTTLGVEFGYKDLQIDKYKVRLRVWDTC 63
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G E S+ +YY+ A A+LV+ + SF
Sbjct: 64 GQENFRSIIRAYYRNALGALLVYDITCRKSF 94
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 60.5 bits (140), Expect = 8e-10
Identities = 33/99 (33%), Positives = 51/99 (51%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
K++L GE VGKSSL RF+ N F + +T+ K V D L +WDT G
Sbjct: 14 KIVLLGEGCVGKSSLVLRFVENKF--SCKHLSTIQASFQNKTVNVEDCQADLHIWDTAGQ 71
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKL 499
E+ ++ YY+ + +LVF + + SF + N L++
Sbjct: 72 EKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEI 110
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 60.5 bits (140), Expect = 8e-10
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEK--LYQVA-------DKD 349
++K + G+ GVGK+S R+ +NTF +T+G+D EK +Y+ + +
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFT--GQFISTVGIDFKEKKVVYKSSRGGFGGRGQR 64
Query: 350 VKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSF 469
V LQLWDT G ER S+T+++++ A IL+F + N SF
Sbjct: 65 VLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSF 104
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 490 LEIVSYAENAKIFLCGNKYDLE 555
L++ +Y E I +CGNK DLE
Sbjct: 114 LKVHAYCEQPDIIICGNKADLE 135
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 60.5 bits (140), Expect = 8e-10
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEK--LYQVA-------DKD 349
++K + G+ GVGK+S R+ +NTF +T+G+D EK +Y+ + +
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFT--GQFISTVGIDFKEKKVVYKSSRGGFGGRGQR 64
Query: 350 VKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSF 469
V LQLWDT G ER S+T+++++ A IL+F + N SF
Sbjct: 65 VLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSF 104
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 490 LEIVSYAENAKIFLCGNKYDLE 555
L++ +Y E I +CGNK DLE
Sbjct: 114 LKVHAYCEQPDIIICGNKADLE 135
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
KVI+ G VGK+ L RF F +++ AT+G+D E+ + ++ +++QLWDT G
Sbjct: 102 KVIIVGNAAVGKTCLSFRFCCGRFPEHTE--ATIGVDFRERSCVIENELLRVQLWDTAGQ 159
Query: 383 ERI-ASVTSSYYKFAEAAILVFLLDNASSFHILS 481
ER S+ + YY+ A + V+ + SF+ L+
Sbjct: 160 ERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLA 193
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +2
Query: 254 RFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAA 433
RF+++ F P ++ AT+G+D + VKL +WDT G ER ++T SYY+ A+
Sbjct: 3 RFVDDVFDP--EQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQERFRTLTPSYYRGAQGV 60
Query: 434 ILVFLLDNASSFHILSN 484
I V+ + + SSF L++
Sbjct: 61 ICVYDVTSRSSFEKLNH 77
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 55.2 bits (127), Expect = 3e-08
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRR-ATLGLDHFEKLYQVADKDVKLQLWDT 373
+ K++L G+ GVGK+ + +RF N TFV DR+ T+G+D K V K VKLQ+WDT
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFV---DRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Query: 374 GG 379
G
Sbjct: 67 AG 68
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 54.8 bits (126), Expect = 4e-08
Identities = 28/95 (29%), Positives = 53/95 (55%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
KV++ G GVGKS+L +F+++TF+ D D + K +V + L++ DT G
Sbjct: 5 KVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIE---DFYRKEIEVDGQPSVLEILDTAGT 61
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFHILSNI 487
E+ +S+ Y K + ++V+ + + +FH + N+
Sbjct: 62 EQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNM 96
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVA-DKDVKLQLWDT 373
V+K+++ G+ GK+S+ +RF +F + TLGLD F + + + V +Q+WD
Sbjct: 35 VIKIVVVGDGASGKTSICQRFAKESF--DKSYHQTLGLDFFSRRITLPHEMQVLVQVWDI 92
Query: 374 GGMERIASVTSSYYKFAEAAILVFLLDNASSF 469
GG + Y A LV+ + N+ SF
Sbjct: 93 GGQSIAGEMIDKYLTGANIVFLVYDVTNSKSF 124
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 51.2 bits (117), Expect = 5e-07
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 194 PVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDT 373
P K++L G+ G GK++ +R + F ATLG++ ++ ++ +WDT
Sbjct: 8 PTFKLVLVGDGGTGKTTFVKRHLTGEF--EKKYVATLGVEVHPLVFHTNRGQIRFNVWDT 65
Query: 374 GGMERIASVTSSYYKFAEAAILVF 445
G E+ + YY + AI++F
Sbjct: 66 AGQEKFGGLRDGYYIQGQCAIIMF 89
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K I+ G+ GVGKS L +F + F P D T+G++ ++ + K +KLQ+WDT
Sbjct: 6 LFKHIIIGDTGVGKSCLLLQFTDKRFQPVHD--LTIGVEFGARMVTIDGKQIKLQMWDTA 63
Query: 377 GME 385
G E
Sbjct: 64 GQE 66
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/57 (38%), Positives = 38/57 (66%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDT 373
+++ GE VGK+SL RF+ ++F ++ +AT+G+D K + D+ V+LQ+WDT
Sbjct: 12 ELVFLGEQSVGKTSLITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTVRLQMWDT 66
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/59 (42%), Positives = 37/59 (62%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDT 373
+ K+++ G+ GVGKSSL RF +NTF N T+G+D + + + VKLQ+WDT
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSEN--YITTIGVDFKIRTMDINGQRVKLQIWDT 66
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K I+ G+ GVGKS L +F F+ +D T+G++ ++ +V+ + +KLQ+WDT
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFM--ADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA 68
Query: 377 G 379
G
Sbjct: 69 G 69
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
+ K++L G+ GVGKS L RF ++T+ + +T+G+D + ++ K +KLQ+WDT
Sbjct: 11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYI--STIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 377 G 379
G
Sbjct: 69 G 69
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
V KVI+ G GVGKS+L +F+ + FV + D + K + ++ + + DT
Sbjct: 17 VHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKA---DSYRKKVVLDGEECSIDILDTA 73
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G E +++ +YY+ E I VF + + SF
Sbjct: 74 GQEDYSAIRDNYYRSGEGFICVFSILDMESF 104
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 47.2 bits (107), Expect = 8e-06
Identities = 29/113 (25%), Positives = 51/113 (45%)
Frame = +2
Query: 188 KTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLW 367
K P K+++ G+ GVGKSSL +F FV D D + + ++ V + +
Sbjct: 14 KLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE---DQYIQHCEIDGNWVIMDVL 70
Query: 368 DTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKTQRY 526
DT G E +++ Y + +LVF + SF +Y ++ ++ Y
Sbjct: 71 DTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY 123
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 47.2 bits (107), Expect = 8e-06
Identities = 29/113 (25%), Positives = 51/113 (45%)
Frame = +2
Query: 188 KTPVLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLW 367
K P K+++ G+ GVGKSSL +F FV D D + + ++ V + +
Sbjct: 14 KLPYYKLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIE---DQYIQHCEIDGNWVIMDVL 70
Query: 368 DTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKTQRY 526
DT G E +++ Y + +LVF + SF +Y ++ ++ Y
Sbjct: 71 DTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVLRVKDRSEY 123
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 47.2 bits (107), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +2
Query: 203 KVILCGEYGVGKSS-LFRRFINNTFVP-NSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
KV++ G+ GVGK+S ++R + P N+ A+ Y+ + V+LQ+WDT
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQVWDTA 113
Query: 377 GMERIASVTSSYYKFAEAAILVFLLDNASSF 469
G ER + Y + A+AA++V+ + + ++F
Sbjct: 114 GQERFRCMVPMYMRNADAALIVYDVTDRNTF 144
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/99 (32%), Positives = 45/99 (45%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
KV + G VGKS+L RF N F +R + D K +D L++ DT G
Sbjct: 15 KVAVMGYPHVGKSALVLRFTQNIF---PERYESTIEDQHSKHIAAFHRDYHLRVTDTAGQ 71
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKL 499
+ S ILV+ +D+ SF + SNIY K+
Sbjct: 72 QEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKI 110
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/55 (34%), Positives = 36/55 (65%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLW 367
K++ GE VGK+S+ RF+ ++F ++ +AT+G+D K + D+ ++LQ+W
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSF--DNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/93 (26%), Positives = 51/93 (54%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+++++ G GK++L ++F++ P TLG D + V KD +L LWD GG
Sbjct: 17 MRILILGLDNAGKTTLMKKFLDE---PTDTIEPTLGFD----IKTVHFKDFQLNLWDVGG 69
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHIL 478
+ + S +Y++ +A L++++D++ +L
Sbjct: 70 QKSLRSYWKNYFESTDA--LIWVVDSSDRERLL 100
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/95 (28%), Positives = 45/95 (47%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
LK I G VGK+S+ + N + N A D+F + V K ++LQL DT G
Sbjct: 10 LKCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTA---FDNFSVVVLVDKKPIRLQLHDTAG 66
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
++ Y A+ ++V+ + + SF +S+
Sbjct: 67 QSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSH 101
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D++ V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAF--PGEYIPTV-FDNYSANVMVDGRPINLGLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
E + Y + ++ F L+N +SF N+ K Y
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWY 98
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D++ V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAF--PGEYIPTV-FDNYSANVMVDGRPINLGLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
E + Y + ++ F L+N +SF N+ K Y
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWY 98
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D++ V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAF--PGEYIPTV-FDNYSANVMVDGRPINLGLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
E + Y + ++ F L+N +SF N+ K Y
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWY 98
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D++ V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAF--PGEYIPTV-FDNYSANVMVDGRPINLGLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
E + Y + ++ F L+N +SF N+ K Y
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWY 98
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/101 (26%), Positives = 46/101 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D++ V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAF--PGEYIPTV-FDNYSANVMVDGRPINLGLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
E + Y + ++ F L+N +SF N+ K Y
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWY 98
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
+V+L G G GK+S+ RR T+G + E ++ K+ +L WD GG+
Sbjct: 371 RVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFN-IETIHY---KNYRLNFWDVGGL 426
Query: 383 ERIASVTSSYYKFAEAAILV 442
++ + YY A+A V
Sbjct: 427 PKLRHLWKHYYSNAQAIFYV 446
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/101 (24%), Positives = 44/101 (43%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D + V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAF--PGEYILTV-FDTYSTNVMVDGRPINLSLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
+ + + ++ F L+N +SF N+ K Y
Sbjct: 61 QDDYDQFRHLSFPQTDVFLVCFALNNPASF---ENVRAKWY 98
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 36.7 bits (81), Expect = 0.011
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEK--LYQVA-------DKD 349
++K + G+ GVGK+S R+ +NTF +T+G+D EK +Y+ + +
Sbjct: 7 LIKFLAPGDPGVGKTSFLHRYTDNTF--TGQFISTVGIDFKEKKVVYESSRGGFGGRGQR 64
Query: 350 VKLQLWDTGG 379
V LQ+WDT G
Sbjct: 65 VLLQIWDTAG 74
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 36.7 bits (81), Expect = 0.011
Identities = 25/101 (24%), Positives = 44/101 (43%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D + V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAF--PGEYILTV-FDTYSTNVMVDGRPINLSLWDTAG 60
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLY 502
+ + + ++ F L+N +SF N+ K Y
Sbjct: 61 QDDYDQFRHLSFPQTDVFLVCFALNNPASF---ENVRAKWY 98
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 35.5 bits (78), Expect = 0.026
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Frame = +2
Query: 188 KTPVLKVILCGEYGVGKSSLFRRF----INNTFVPN---SDRRATLGLDHFEKLYQVADK 346
K +LKVI+ G+ GVGK+SL ++ + N +V + +AT+G D + + D+
Sbjct: 6 KKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNIDDR 65
Query: 347 DVKLQ 361
V LQ
Sbjct: 66 TVTLQ 70
>Z49967-8|CAA90255.1| 180|Caenorhabditis elegans Hypothetical
protein F54C9.10 protein.
Length = 180
Score = 35.1 bits (77), Expect = 0.035
Identities = 23/87 (26%), Positives = 44/87 (50%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+++++ G G GK+++ R V T+G + + QV K++K Q+WD GG
Sbjct: 17 MRILILGLDGAGKTTILYRLQVGEVVTTIP---TIGFN----VEQVEYKNLKFQVWDLGG 69
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNA 460
I YY +A +++++D+A
Sbjct: 70 QTSIRPYWRCYYANTDA--IIYVVDSA 94
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 35.1 bits (77), Expect = 0.035
Identities = 28/103 (27%), Positives = 57/103 (55%), Gaps = 4/103 (3%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTG-- 376
++++ G VGK+++ RR++ N F +S + T+ D + +++ + L + DT
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEF--SSKYKETIE-DLHSREFRIQGVPLPLDILDTNFN 75
Query: 377 --GMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKL 499
M R+ S+ S A A +LVF +D+ +SF +S+I+ ++
Sbjct: 76 FPDMRRL-SIAS-----ASAFLLVFSVDDVTSFKEMSDIWQEI 112
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 34.3 bits (75), Expect = 0.061
Identities = 19/91 (20%), Positives = 47/91 (51%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
K+I+ G GK+++ ++ V + + T+G + +V+ +++ +WD GG
Sbjct: 19 KIIVVGLDNAGKTTILYNYVTKDQV---ETKPTIG----SNVEEVSYRNLDFVIWDIGGQ 71
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNASSFHI 475
E + S+YY + +++ ++D++ + I
Sbjct: 72 ESLRKSWSTYY--VQTDVVIVVIDSSDTTRI 100
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 34.3 bits (75), Expect = 0.061
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 335 VADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNA 460
V K++K +WD GG ++I + YY +A L+F++D A
Sbjct: 52 VTYKNIKFNVWDVGGQDKIRPLWRHYYTGTQA--LIFVMDAA 91
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 33.9 bits (74), Expect = 0.080
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +2
Query: 197 VLKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVAD 343
+ KV+L GVGK+ L R+F F P + AT+G+D K +V +
Sbjct: 7 LFKVVLVPNAGVGKTCLVRKFTQGIFPPG--QSATIGVDFMIKTVKVGN 53
>Z93378-2|CAB07583.1| 184|Caenorhabditis elegans Hypothetical
protein F19H8.3 protein.
Length = 184
Score = 33.1 bits (72), Expect = 0.14
Identities = 20/86 (23%), Positives = 42/86 (48%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
++++L G GK+++ ++ + + D + F A D++L +WD GG
Sbjct: 18 IRILLLGLDNAGKTTILKQ------LSSEDVQHVTPTKGFNVKTVAAMGDIRLNVWDIGG 71
Query: 380 MERIASVTSSYYKFAEAAILVFLLDN 457
I S+YY+ + L+F++D+
Sbjct: 72 QRSIRPYWSNYYENIDT--LIFVIDS 95
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/107 (23%), Positives = 49/107 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+++ L G GK++ + F D T+G + + ++ +V ++LWD GG
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFT--EDMIPTVGFN----MRKITKGNVTIKLWDIGG 74
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKTQ 520
R S+ Y + A +VF++D A + ++ + L+ K Q
Sbjct: 75 QPRFRSMWERYCRGVNA--IVFMVDAADEEKLEASRNELMQLLDKPQ 119
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.25
Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 7/95 (7%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRR--ATLGLD-----HFEKLYQVADKDVKLQ 361
K+++ G+ VGK+SL P R +T+G H + + L+
Sbjct: 10 KILVLGDSCVGKTSLCHCIAGGGEPPGGGRSFDSTIGATVVMAWHEYRAGTPEQRTELLE 69
Query: 362 LWDTGGMERIASVTSSYYKFAEAAILVFLLDNASS 466
LWD GGM +++ A AILV L N S
Sbjct: 70 LWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRS 104
>AC087079-5|ABC48240.1| 367|Caenorhabditis elegans Hypothetical
protein Y37E3.5b protein.
Length = 367
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 188 KTPVLK-VILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQL 364
+TP+++ I G +G+G + F+ + D R L + F + D+ L +
Sbjct: 17 RTPIIRREIKLGCFGIGSAGK-TTFLK--VLKGEDPRDLLRTNGFSTVKMEYDETFHLTI 73
Query: 365 WDTGGMERIASVTSSYYKFAEAAILVFLLD 454
+D GG + I + S+YY AE +++++D
Sbjct: 74 YDVGGDKGIRGIWSNYY--AEVHGIIYVID 101
>AC087079-4|ABC48239.1| 370|Caenorhabditis elegans Hypothetical
protein Y37E3.5a protein.
Length = 370
Score = 32.3 bits (70), Expect = 0.25
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +2
Query: 188 KTPVLK-VILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQL 364
+TP+++ I G +G+G + F+ + D R L + F + D+ L +
Sbjct: 17 RTPIIRREIKLGCFGIGSAGK-TTFLK--VLKGEDPRDLLRTNGFSTVKMEYDETFHLTI 73
Query: 365 WDTGGMERIASVTSSYYKFAEAAILVFLLD 454
+D GG + I + S+YY AE +++++D
Sbjct: 74 YDVGGDKGIRGIWSNYY--AEVHGIIYVID 101
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 32.3 bits (70), Expect = 0.25
Identities = 25/107 (23%), Positives = 49/107 (45%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+++ L G GK++ + F D T+G + + ++ +V ++LWD GG
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFT--EDMIPTVGFN----MRKITKGNVTIKLWDIGG 74
Query: 380 MERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKLYLMQKTQ 520
R S+ Y + A +VF++D A + ++ + L+ K Q
Sbjct: 75 QPRFRSMWERYCRGVNA--IVFMVDAADEEKLEASRNELMQLLDKPQ 119
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 31.9 bits (69), Expect = 0.32
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +2
Query: 206 VILCGEYGVGKSSLFRR----FINNTFVPNSDR-RATLGLDHFEKLYQVADKDVKLQLWD 370
V++ G GK++ + F+ + V N + AT+GL+ V + L WD
Sbjct: 20 VVIVGLDNAGKTTFLEQTKSHFVKDYGVLNPSKITATVGLN----TGNVELNNTCLHFWD 75
Query: 371 TGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSN 484
GG E + + ++YY A A I V + F I+++
Sbjct: 76 LGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVAS 113
>Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical
protein M01E5.1 protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.43
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 157 SKKETKYGCCKNSCIESN 210
S ETK+GCCK SC E++
Sbjct: 38 SNNETKFGCCKASCTETS 55
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWD 370
LK+++ G+ VGK+ L++R +F + + + Y+ D VK+ +WD
Sbjct: 44 LKIVIRGDRNVGKTCLWKRLQGLSFQEEYVATEEIQVANINWNYRATDDVVKVDVWD 100
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 200 LKVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGG 379
+K ++ G+ VGK+ L + N F + T+ D++ V + + L LWDT G
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAF--PGEYIPTV-FDNYSANVMVDGRPINLGLWDTAG 60
Query: 380 ME 385
E
Sbjct: 61 QE 62
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 31.1 bits (67), Expect = 0.57
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = +2
Query: 203 KVILCGEYGVGKSS-LFRRFINNTFVP-NSDRRATLGLDHFEKLYQVADKDVKLQLWDTG 376
KV++ G+ GVGK+S ++R + P N+ A+ Y+ + V+LQ+WDT
Sbjct: 54 KVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGADYRDREDVVRLQMWDTA 113
Query: 377 G 379
G
Sbjct: 114 G 114
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 30.7 bits (66), Expect = 0.75
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRA-TLGLDHFEKLYQVADKDVKLQLWDTGG 379
KV+L G+ G GK+S+ N + R T+ ++H + ++ L LWD GG
Sbjct: 6 KVLLMGKSGSGKTSMRSIIFANYIARDCSRLGPTIEVEHAHVKFL---GNMVLHLWDCGG 62
Query: 380 MERIAS---VTSSYYKFAEAAILVFLLD 454
E V+ F +L+++ D
Sbjct: 63 QESFMENFLVSQKDQIFKNVQVLIYVFD 90
>Z83319-4|CAB05909.1| 734|Caenorhabditis elegans Hypothetical
protein T02D1.5 protein.
Length = 734
Score = 30.3 bits (65), Expect = 0.99
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 170 QNMAVVKTPVLKVILCGEYGVGKSSLFR 253
+NM + +P + V++ G G GKSSLFR
Sbjct: 485 KNMTLTISPGMHVLITGPNGCGKSSLFR 512
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 30.3 bits (65), Expect = 0.99
Identities = 21/86 (24%), Positives = 43/86 (50%)
Frame = +2
Query: 203 KVILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGM 382
+ ++ G G GK+++ + N V + T+G + + V + + L +WD GG
Sbjct: 19 RTLMLGLDGAGKTTILYKLKLNETV---NTIPTIGFN----VETVTFQKITLTVWDVGGQ 71
Query: 383 ERIASVTSSYYKFAEAAILVFLLDNA 460
++I ++ Y F LVF++D++
Sbjct: 72 KKIRALWK--YYFPNTTTLVFVVDSS 95
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 30.3 bits (65), Expect = 0.99
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +2
Query: 209 ILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGL 310
++ GE GVGKSSL RF+++ P +R ++G+
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDP--ERAVSIGV 32
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 308 LDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEA 430
L H + LY+ K+ L WDTG +E + + Y +A
Sbjct: 1090 LAHMDILYEKPKKEKPLPQWDTGLIEELKKLKEQYDDIPDA 1130
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +2
Query: 308 LDHFEKLYQVADKDVKLQLWDTGGMERIASVTSSYYKFAEA 430
L H + LY+ K+ L WDTG +E + + Y +A
Sbjct: 1090 LAHMDILYEKPKKEKPLPQWDTGLIEELKKLKEQYDDIPDA 1130
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 344 KDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDN 457
K++ +WD GG ++I + Y++ + L+F++D+
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQG--LIFVVDS 94
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 344 KDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDN 457
K++ +WD GG ++I + Y++ + L+F++D+
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQG--LIFVVDS 94
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 28.3 bits (60), Expect = 4.0
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 344 KDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDN 457
K++ +WD GG ++I + Y++ + L+F++D+
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQG--LIFVVDS 94
>AC006830-8|ABA00186.1| 289|Caenorhabditis elegans Hypothetical
protein ZK105.8 protein.
Length = 289
Score = 28.3 bits (60), Expect = 4.0
Identities = 22/84 (26%), Positives = 37/84 (44%)
Frame = -2
Query: 396 EAILSIPPVSHNCNLTSLSATWYNFSK*SKPKVALRSEFGTKVLLMNLRNNELFPTPYSP 217
+ L IPP+ L +S N K + K+A + +F + L+ L N E++ P
Sbjct: 117 KGFLHIPPI-----LVCVSFALSNLDKSEETKIA-KEKFPYLLPLLILPNVEMYSDSSIP 170
Query: 216 HKITFNTGVFTTAIFCLFFTINYF 145
+T +FT ++C YF
Sbjct: 171 IILTLIFMIFTFVLYCSLILYFYF 194
>U50068-6|AAB37736.2| 1079|Caenorhabditis elegans Hypothetical
protein C01G5.4 protein.
Length = 1079
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 329 YQVADKDVKLQLWDTGGMERIASVTSSYYKFAEAAILVFLLDNASSFHILSNIYLKL 499
Y K K+ L D ERI SVT+ Y + ++ F+ D + + I +KL
Sbjct: 491 YSSLSKGFKILLNDYDECERIQSVTTDYIRSPGITLIRFVKDVQKPINEMLEIAMKL 547
>U28928-8|AAA68340.1| 661|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 2 protein.
Length = 661
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 206 VILCGEYGVGKSSLFR 253
V++CG G GKSSLFR
Sbjct: 471 VLVCGPNGCGKSSLFR 486
>U28928-7|AAA68339.1| 665|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 1 protein.
Length = 665
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 206 VILCGEYGVGKSSLFR 253
V++CG G GKSSLFR
Sbjct: 475 VLVCGPNGCGKSSLFR 490
>AY008133-1|AAG32086.1| 363|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 122 SAVNVLRQK*LIVKKRQNMAVVKTPVLKVILCGEYGVGKSSLFRR 256
SA ++ R+ LI ++ + + +LK++L G GKS++F++
Sbjct: 2 SAADMARKNSLINRQLEKEKIDSKKMLKILLLGGPECGKSTIFKQ 46
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +2
Query: 206 VILCGEYGVGKSSLFRRFINNTFVPNSDRRATLGLDHFEKLYQVADKDVKLQLWDTGGME 385
+++C G GK+++ I NT + + R + D F+ +Y K + ++ ++ G +
Sbjct: 111 LLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFG-K 169
Query: 386 RIA 394
R+A
Sbjct: 170 RLA 172
>AF077536-9|AAK31414.1| 363|Caenorhabditis elegans G protein, alpha
subunit protein 11 protein.
Length = 363
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 122 SAVNVLRQK*LIVKKRQNMAVVKTPVLKVILCGEYGVGKSSLFRR 256
SA ++ R+ LI ++ + + +LK++L G GKS++F++
Sbjct: 2 SAADMARKNSLINRQLEKEKIDSKKMLKILLLGGPECGKSTIFKQ 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,595,686
Number of Sequences: 27780
Number of extensions: 252934
Number of successful extensions: 867
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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