Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2111
         (729 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    25   0.47 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.7  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 58  YTEILELISQGGWRI 14
           Y EI+EL  +GGW++
Sbjct: 299 YNEIVELQKEGGWKV 313


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 314 NTNYL*QVIIIIKCGLLKEGTLGSQPTIFNDV 219
           N N   + +   +C   K   L  QP ++NDV
Sbjct: 166 NFNVFLRQVFTCRCKDYKNEDLEDQPVVYNDV 197


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 517 FDYCGISSKIFKRTPLDGPF 458
           + Y GI+++ FK  PL+  F
Sbjct: 55  YGYAGINAETFKAQPLNELF 74


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 728 AWILFTVILLFLTSVAKLRID*ILFVFVNILYSVVL 621
           A+ILFTV LL L  +       +LF    I++++ L
Sbjct: 244 AFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,385
Number of Sequences: 336
Number of extensions: 3034
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)