Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2102
         (683 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor de...    30   8.8  
BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor, n...    30   8.8  
BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor, n...    30   8.8  
AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.              30   8.8  

>X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor delta
           subunit protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 183 KRILYLFNNYVFCCLLNYVINLYFYL 260
           K + Y+ N  V C L+++++NL FYL
Sbjct: 245 KPLFYIINILVPCVLISFMVNLVFYL 270


>BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 183 KRILYLFNNYVFCCLLNYVINLYFYL 260
           K + Y+ N  V C L+++++NL FYL
Sbjct: 245 KPLFYIINILVPCVLISFMVNLVFYL 270


>BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 183 KRILYLFNNYVFCCLLNYVINLYFYL 260
           K + Y+ N  V C L+++++NL FYL
Sbjct: 245 KPLFYIINILVPCVLISFMVNLVFYL 270


>AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.
          Length = 517

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +3

Query: 183 KRILYLFNNYVFCCLLNYVINLYFYL 260
           K + Y+ N  V C L+++++NL FYL
Sbjct: 245 KPLFYIINILVPCVLISFMVNLVFYL 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,389,267
Number of Sequences: 237096
Number of extensions: 1527796
Number of successful extensions: 7391
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7383
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)