Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2102
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S67765-1|AAB29442.1|  224|Drosophila melanogaster alpha-spectrin...    29   5.9  
M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein ( D.me...    29   5.9  
AY069741-1|AAL39886.1|  856|Drosophila melanogaster LP06350p pro...    29   5.9  
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P...    29   5.9  
AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA ...    29   5.9  

>S67765-1|AAB29442.1|  224|Drosophila melanogaster alpha-spectrin
           protein.
          Length = 224

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +1

Query: 433 GFTLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRYPKSDILFGKPTN--SQDALVNETKE 606
           G+ LP+  + +P  EFE       P  D +  ++   + ++  +  N  S + + N  + 
Sbjct: 107 GYDLPMVEEGQPDPEFEAILDVVDPNRDGYVSLQEYIAFMISKETENVQSYEEIENAFRA 166

Query: 607 VTAASAFNVVKEKDWSKHTKPCQD 678
           +TAA    V KE+ +   TK   D
Sbjct: 167 ITAADRPYVTKEELYCNLTKDMAD 190


>M26400-1|AAA28907.1| 2415|Drosophila melanogaster protein (
            D.melanogaster alpha-spectrin mRNA, complete cds. ).
          Length = 2415

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +1

Query: 433  GFTLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRYPKSDILFGKPTN--SQDALVNETKE 606
            G+ LP+  + +P  EFE       P  D +  ++   + ++  +  N  S + + N  + 
Sbjct: 2298 GYDLPMVEEGQPDPEFEAILDVVDPNRDGYVSLQEYIAFMISKETENVQSYEEIENAFRA 2357

Query: 607  VTAASAFNVVKEKDWSKHTKPCQD 678
            +TAA    V KE+ +   TK   D
Sbjct: 2358 ITAADRPYVTKEELYCNLTKDMAD 2381


>AY069741-1|AAL39886.1|  856|Drosophila melanogaster LP06350p
           protein.
          Length = 856

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +1

Query: 433 GFTLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRYPKSDILFGKPTN--SQDALVNETKE 606
           G+ LP+  + +P  EFE       P  D +  ++   + ++  +  N  S + + N  + 
Sbjct: 739 GYDLPMVEEGQPDPEFEAILDVVDPNRDGYVSLQEYIAFMISKETENVQSYEEIENAFRA 798

Query: 607 VTAASAFNVVKEKDWSKHTKPCQD 678
           +TAA    V KE+ +   TK   D
Sbjct: 799 ITAADRPYVTKEELYCNLTKDMAD 822


>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
           isoform A protein.
          Length = 2529

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = +1

Query: 457 KTKPTKEFEPFAGSPPPPEDSFFYIRYPKSDILFGKPTNSQDALVNETKEVTAASAFNVV 636
           K KP  E +     PP PE+S    + PK  +   K    + +LV  T   T ++A +  
Sbjct: 227 KEKPKAEQQ--ITPPPAPEESPAS-KVPKKTVQQAKKAKVESSLVQATVLTTTSAATSAP 283

Query: 637 KEKDWSKHT 663
                SKHT
Sbjct: 284 SSASTSKHT 292


>AE014296-357|AAF47569.1| 2415|Drosophila melanogaster CG1977-PA
            protein.
          Length = 2415

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = +1

Query: 433  GFTLPVWMKTKPTKEFEPFAGSPPPPEDSFFYIRYPKSDILFGKPTN--SQDALVNETKE 606
            G+ LP+  + +P  EFE       P  D +  ++   + ++  +  N  S + + N  + 
Sbjct: 2298 GYDLPMVEEGQPDPEFEAILDVVDPNRDGYVSLQEYIAFMISKETENVQSYEEIENAFRA 2357

Query: 607  VTAASAFNVVKEKDWSKHTKPCQD 678
            +TAA    V KE+ +   TK   D
Sbjct: 2358 ITAADRPYVTKEELYCNLTKDMAD 2381


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,431,784
Number of Sequences: 53049
Number of extensions: 486985
Number of successful extensions: 1552
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1550
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)