Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2099
(776 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8IMX7 Cluster: Mitochondrial Rho GTPase; n=3; Sophopho... 67 4e-10
UniRef50_Q0JHT9 Cluster: Os01g0843300 protein; n=2; Oryza sativa... 57 4e-07
UniRef50_Q8IXI2 Cluster: Mitochondrial Rho GTPase 1; n=80; Eumet... 57 4e-07
UniRef50_Q6ATR5 Cluster: Expressed protein; n=6; Oryza sativa|Re... 55 2e-06
UniRef50_UPI00004D830A Cluster: Mitochondrial Rho GTPase 1 (EC 3... 52 1e-05
UniRef50_Q4S4S0 Cluster: Chromosome 2 SCAF14738, whole genome sh... 52 1e-05
UniRef50_Q9LYA8 Cluster: Rac-GTP binding protein-like; n=6; Magn... 51 4e-05
UniRef50_Q9MA88 Cluster: T12H1.28 protein; n=7; core eudicotyled... 47 6e-04
UniRef50_Q5KEW5 Cluster: Mitochondrial Rho GTPase 1; n=2; Filoba... 42 0.013
UniRef50_Q94263 Cluster: Mitochondrial Rho GTPase; n=4; Caenorha... 41 0.040
UniRef50_Q55G45 Cluster: Mitochondrial GTPase; n=1; Dictyosteliu... 38 0.28
UniRef50_O59781 Cluster: Mitochondrial Rho GTPase 1; n=1; Schizo... 37 0.65
UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD... 34 3.4
UniRef50_Q3CGB5 Cluster: Putative uncharacterized protein precur... 34 4.6
UniRef50_P39722 Cluster: Mitochondrial Rho GTPase 1; n=6; Saccha... 34 4.6
UniRef50_Q8I5U2 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q55E10 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_Q09F89 Cluster: Ymf71; n=1; Tetrahymena malaccensis|Rep... 33 8.0
>UniRef50_Q8IMX7 Cluster: Mitochondrial Rho GTPase; n=3;
Sophophora|Rep: Mitochondrial Rho GTPase - Drosophila
melanogaster (Fruit fly)
Length = 652
Score = 67.3 bits (157), Expect = 4e-10
Identities = 27/39 (69%), Positives = 35/39 (89%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFL 128
VTRE++ID+AK+QSSR+VY+CHVIGP+ GKT +CR FL
Sbjct: 429 VTRERRIDLAKRQSSRSVYKCHVIGPKGSGKTGMCRGFL 467
>UniRef50_Q0JHT9 Cluster: Os01g0843300 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os01g0843300 protein -
Oryza sativa subsp. japonica (Rice)
Length = 597
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/47 (48%), Positives = 34/47 (72%)
Frame = +3
Query: 6 FPVTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLGIGHKV 146
F TR++++D KKQ+ RNV+QC+V GPR GKT++ +SFL H +
Sbjct: 377 FTTTRKRRVDRKKKQTQRNVFQCYVFGPRHAGKTALLQSFLKRYHSI 423
>UniRef50_Q8IXI2 Cluster: Mitochondrial Rho GTPase 1; n=80;
Eumetazoa|Rep: Mitochondrial Rho GTPase 1 - Homo sapiens
(Human)
Length = 618
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/40 (55%), Positives = 34/40 (85%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLG 131
VTR+KKID+ KKQ+ RNV++C+VIG ++CGK+ + ++ LG
Sbjct: 401 VTRDKKIDLQKKQTQRNVFRCNVIGVKNCGKSGVLQALLG 440
>UniRef50_Q6ATR5 Cluster: Expressed protein; n=6; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 642
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = +3
Query: 6 FPVTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLG 131
F R++++D K+Q+ RNV+QC+V GPR GKT++ +SFLG
Sbjct: 405 FTTMRKRRVDRKKQQTQRNVFQCYVFGPRGAGKTALLQSFLG 446
>UniRef50_UPI00004D830A Cluster: Mitochondrial Rho GTPase 1 (EC
3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family
member T1) (Rac-GTP-binding protein-like protein).; n=1;
Xenopus tropicalis|Rep: Mitochondrial Rho GTPase 1 (EC
3.6.5.-) (MIRO-1) (hMiro-1) (Ras homolog gene family
member T1) (Rac-GTP-binding protein-like protein). -
Xenopus tropicalis
Length = 593
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/40 (55%), Positives = 32/40 (80%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLG 131
VTR+KKID+ K+Q+ RNV++C+VIG + GK+ I +S LG
Sbjct: 376 VTRDKKIDLHKRQTQRNVFRCNVIGSQGSGKSGILQSHLG 415
>UniRef50_Q4S4S0 Cluster: Chromosome 2 SCAF14738, whole genome
shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 2
SCAF14738, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 651
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/40 (55%), Positives = 30/40 (75%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLG 131
VTREK +D+ + Q+ R+V+ C VIGPR GKT+ R+FLG
Sbjct: 401 VTREKGVDLERHQTQRSVFICKVIGPRGTGKTAFLRAFLG 440
>UniRef50_Q9LYA8 Cluster: Rac-GTP binding protein-like; n=6;
Magnoliophyta|Rep: Rac-GTP binding protein-like -
Arabidopsis thaliana (Mouse-ear cress)
Length = 676
Score = 50.8 bits (116), Expect = 4e-05
Identities = 20/42 (47%), Positives = 31/42 (73%)
Frame = +3
Query: 6 FPVTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLG 131
F VTR++ +D K+++ RNV+QC V GP+ GK+++ SFLG
Sbjct: 446 FSVTRKRSVDRKKQRTERNVFQCFVFGPKKSGKSALLDSFLG 487
>UniRef50_Q9MA88 Cluster: T12H1.28 protein; n=7; core
eudicotyledons|Rep: T12H1.28 protein - Arabidopsis
thaliana (Mouse-ear cress)
Length = 648
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLGIGHKVDINDS 161
VTR++ +D +K+S R V QC V GP++ GK+++ F+G + D N++
Sbjct: 410 VTRKRVLDRKEKKSERKVVQCFVFGPKNAGKSALLNQFIGRSYDDDSNNN 459
>UniRef50_Q5KEW5 Cluster: Mitochondrial Rho GTPase 1; n=2;
Filobasidiella neoformans|Rep: Mitochondrial Rho GTPase
1 - Cryptococcus neoformans (Filobasidiella neoformans)
Length = 686
Score = 42.3 bits (95), Expect = 0.013
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFL 128
VTR +K D +++ +RNV+ C+V+G GKTS+ RSF+
Sbjct: 440 VTRPRKQDRRQRKVTRNVFLCYVLGATGSGKTSLLRSFV 478
>UniRef50_Q94263 Cluster: Mitochondrial Rho GTPase; n=4;
Caenorhabditis|Rep: Mitochondrial Rho GTPase -
Caenorhabditis elegans
Length = 625
Score = 40.7 bits (91), Expect = 0.040
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLGIG 137
VTRE+K D+ + R V+QC V+G + GKT +S G G
Sbjct: 409 VTRERKKDLENHGTDRKVFQCLVVGAKDAGKTVFMQSLAGRG 450
>UniRef50_Q55G45 Cluster: Mitochondrial GTPase; n=1; Dictyostelium
discoideum AX4|Rep: Mitochondrial GTPase - Dictyostelium
discoideum AX4
Length = 658
Score = 37.9 bits (84), Expect = 0.28
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +3
Query: 12 VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLG 131
+ +++DI Q +RN+ C+V G + GKT+ +F+G
Sbjct: 405 ILNSRELDIKSNQFTRNIVNCYVFGAEAVGKTTFLNTFIG 444
>UniRef50_O59781 Cluster: Mitochondrial Rho GTPase 1; n=1;
Schizosaccharomyces pombe|Rep: Mitochondrial Rho GTPase
1 - Schizosaccharomyces pombe (Fission yeast)
Length = 630
Score = 36.7 bits (81), Expect = 0.65
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = +3
Query: 24 KKIDIAKKQSS--RNVYQCHVIGPRSCGKTSICRSFL 128
K++ +K S RNV+ C V+G +SCGKT++ SF+
Sbjct: 406 KRVSQNRKVSKYDRNVFLCFVVGSKSCGKTALLSSFI 442
>UniRef50_Q25802 Cluster: RpoD protein; n=2; Plasmodium|Rep: RpoD
protein - Plasmodium falciparum
Length = 960
Score = 34.3 bits (75), Expect = 3.4
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = -3
Query: 498 TYLYLYKRQLSFIYLYYLGGINDKTNYKFNICYFMAH--S*LSWHFLPLFLYCFSSILNL 325
TY YLY + F LY G I + N K+N+ YF+ + + S ++ ++ ++ I +
Sbjct: 462 TY-YLYYYHIKFYNLYNKGIILNNNNNKYNVIYFLINYFNLFSNYYYKIYNNNYNFINSN 520
Query: 324 FYFVELNNVV 295
+YF ++N ++
Sbjct: 521 YYFKKMNFIL 530
>UniRef50_Q3CGB5 Cluster: Putative uncharacterized protein
precursor; n=3; Thermoanaerobacter ethanolicus|Rep:
Putative uncharacterized protein precursor -
Thermoanaerobacter ethanolicus ATCC 33223
Length = 354
Score = 33.9 bits (74), Expect = 4.6
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = -3
Query: 450 YLGGINDKTNYKFNICYFMAHS*LSWHFLPLFLYCFSSILNL--FYFVELNN--VVILSH 283
YL I D+ YK N+ ++ LS +LPLF+ F +NL FY++ L+N V++ H
Sbjct: 209 YLYDITDEGFYKGNLTNIISSILLSKIYLPLFIAFFFVCVNLYFFYYILLHNQKKVMIIH 268
Query: 282 S 280
S
Sbjct: 269 S 269
>UniRef50_P39722 Cluster: Mitochondrial Rho GTPase 1; n=6;
Saccharomycetales|Rep: Mitochondrial Rho GTPase 1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 662
Score = 33.9 bits (74), Expect = 4.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 51 SSRNVYQCHVIGPRSCGKTSICRSFLG 131
+ R V+ C VIG CGK+S+ +FLG
Sbjct: 444 NDRKVFNCFVIGKPCCGKSSLLEAFLG 470
>UniRef50_Q8I5U2 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 526
Score = 33.5 bits (73), Expect = 6.0
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = -3
Query: 483 YKRQLSFIYLYYLGGINDKTNYKFNICYF-MAHS*LSWHFLPLFLYCFSSILNLFYFVEL 307
Y+ L+F YYL IN T YK NI Y + L+ + P + N +Y ++
Sbjct: 386 YETNLNFKLTYYLSIINMNTQYKDNIEYVDYIKNKLTLNLFPPIYIGYDETSNFYYIIQY 445
Query: 306 NNVVILSHSF 277
N L+ F
Sbjct: 446 ENKDFLTIIF 455
>UniRef50_Q55E10 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 877
Score = 33.5 bits (73), Expect = 6.0
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2
Query: 179 LNDAEQNFPSQLINDKLSKSDKQDGTQAHVSIRKECDKITTLLSSTK*NRFNIDEKQYKN 358
LN+ E N QLI D SKSDK +++ KI + + +TK N N D+ N
Sbjct: 497 LNNTETNSAKQLIYDFHSKSDKSISI-SNIKSNNSNSKIISKVITTKTNNDNDDDDNDNN 555
Query: 359 N 361
N
Sbjct: 556 N 556
>UniRef50_Q09F89 Cluster: Ymf71; n=1; Tetrahymena malaccensis|Rep:
Ymf71 - Tetrahymena malaccensis
Length = 97
Score = 33.1 bits (72), Expect = 8.0
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -3
Query: 495 YLYLYKRQLSFIYLYYLGGINDKTNYKFNICYFMAHS*LS-WHFLPLFLYCFSSILNLFY 319
Y+ L ++FI+L+Y + TN FN+ +F+ + W+ F+ + N++Y
Sbjct: 31 YIILLYFLITFIFLFYSNKLKI-TNKNFNLSFFILFIIIIFWNLNLNFINIIDYLYNIYY 89
Query: 318 FVELN 304
F+ LN
Sbjct: 90 FIILN 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,228,213
Number of Sequences: 1657284
Number of extensions: 13561675
Number of successful extensions: 32990
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 31823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32973
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -