Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2099
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    26   0.29 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    26   0.29 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   6.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   8.3  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -3

Query: 486 LYKRQLSFIYLYYLGGINDKTNY--KFNICYFMAHS*LSWHFLPLFLYCFSSILNLFYF 316
           L K+ L F  L  L  + +  N   K + C F+A +   W +     Y F++I+ L ++
Sbjct: 87  LTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIMGLEFY 145


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
 Frame = -3

Query: 486 LYKRQLSFIYLYYLGGINDKTNY--KFNICYFMAHS*LSWHFLPLFLYCFSSILNLFYF 316
           L K+ L F  L  L  + +  N   K + C F+A +   W +     Y F++I+ L ++
Sbjct: 87  LTKKPLWFKLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIMGLEFY 145


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 617 LIEFSHLSSSHLPRF 661
           L EFS+  S HLP+F
Sbjct: 306 LYEFSNFVSQHLPKF 320


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -1

Query: 719 LDLYISIEYRYRYVLTIYSQTWVS 648
           L+ +IS ++ + ++L + SQTW++
Sbjct: 455 LNDFISHQHAWIWLLWLLSQTWIT 478


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -1

Query: 719 LDLYISIEYRYRYVLTIYSQTWVS 648
           L+ +IS ++ + ++L + SQTW++
Sbjct: 455 LNDFISHQHAWIWLLWLLSQTWIT 478


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -1

Query: 719 LDLYISIEYRYRYVLTIYSQTWVS 648
           L+ +IS ++ + ++L + SQTW++
Sbjct: 455 LNDFISHQHAWIWLLWLLSQTWIT 478


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = -1

Query: 719 LDLYISIEYRYRYVLTIYSQTWVS 648
           L+ +IS ++ + ++L + SQTW++
Sbjct: 455 LNDFISHQHAWIWLLWLLSQTWIT 478


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 87  PRSCGKTSICRSFLGIGHK 143
           P  CG+   C +  G+GH+
Sbjct: 35  PSICGEHGHCVNLPGVGHR 53


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 687 ISVLYTNI*I*SGFYGCSVITTEPC 761
           IS+ YTN+   + FY C +     C
Sbjct: 176 ISIAYTNVSTDAFFYTCLIQIETQC 200


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,687
Number of Sequences: 336
Number of extensions: 3780
Number of successful extensions: 19
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)