Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2099
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70855-4|AAB09163.1|  625|Caenorhabditis elegans Hypothetical pr...    41   0.001
U67951-4|AAB07572.1|  398|Caenorhabditis elegans Hypothetical pr...    41   0.001
AC024791-26|AAK29889.1|  421|Caenorhabditis elegans Hypothetical...    41   0.001
AF016449-4|AAG23998.3|  330|Caenorhabditis elegans Serpentine re...    32   0.53 
U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical p...    29   4.9  
Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AF016436-4|AAC25895.2|  331|Caenorhabditis elegans Serpentine re...    29   4.9  

>U70855-4|AAB09163.1|  625|Caenorhabditis elegans Hypothetical
           protein K08F11.5 protein.
          Length = 625

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 12  VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLGIG 137
           VTRE+K D+    + R V+QC V+G +  GKT   +S  G G
Sbjct: 409 VTRERKKDLENHGTDRKVFQCLVVGAKDAGKTVFMQSLAGRG 450


>U67951-4|AAB07572.1|  398|Caenorhabditis elegans Hypothetical
           protein C47C12.4 protein.
          Length = 398

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 12  VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLGIG 137
           VTRE+K D+    + R V+QC V+G +  GKT   +S  G G
Sbjct: 181 VTRERKKDLENHGTDRKVFQCLVVGAKDAGKTVFTQSLAGRG 222


>AC024791-26|AAK29889.1|  421|Caenorhabditis elegans Hypothetical
           protein Y47G6A.27 protein.
          Length = 421

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 18/42 (42%), Positives = 25/42 (59%)
 Frame = +3

Query: 12  VTREKKIDIAKKQSSRNVYQCHVIGPRSCGKTSICRSFLGIG 137
           VTRE+K D+    + R V+QC V+G +  GKT   +S  G G
Sbjct: 206 VTRERKKDLENHGTDRKVFQCLVVGAKDAGKTVFMQSLAGRG 247


>AF016449-4|AAG23998.3|  330|Caenorhabditis elegans Serpentine
           receptor, class t protein16 protein.
          Length = 330

 Score = 31.9 bits (69), Expect = 0.53
 Identities = 14/44 (31%), Positives = 26/44 (59%)
 Frame = -2

Query: 289 IAFFSNGHVCLCTVLFIGFTQFIVNQLRRKVLFCIIQKLKINVL 158
           I +F+N  V +CTVLF G+  ++  +  R +    + K +I++L
Sbjct: 211 IHYFNNFSVIICTVLFYGYIAYVYLKESRSIASKQLSKSQISIL 254


>U40061-5|AAY43979.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK563.7 protein.
          Length = 312

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -3

Query: 525 SWTSVSETATYLYLYKRQLSFIYLYYLGGINDKTNYKFN 409
           SW S        +   R  SFI+  +LGG+N  +N+ FN
Sbjct: 20  SWYSTLRYGALAFSQNRTASFIH--WLGGVNITSNFNFN 56


>Z66494-10|CAF31472.1|  500|Caenorhabditis elegans Hypothetical
           protein C34C6.6b protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -1

Query: 776 LSQLDAWFSSY---NGTSVKTTLDLYIS 702
           L QLD W SSY   N T V TT  LY S
Sbjct: 304 LHQLDKWMSSYLGSNSTQVTTTPPLYSS 331


>Z66494-9|CAA91260.1|  502|Caenorhabditis elegans Hypothetical
           protein C34C6.6a protein.
          Length = 502

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 16/28 (57%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = -1

Query: 776 LSQLDAWFSSY---NGTSVKTTLDLYIS 702
           L QLD W SSY   N T V TT  LY S
Sbjct: 306 LHQLDKWMSSYLGSNSTQVTTTPPLYSS 333


>AF016436-4|AAC25895.2|  331|Caenorhabditis elegans Serpentine
           receptor, class j protein39 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
 Frame = -3

Query: 465 FIYLYYLGGINDKTNYKFNICYFMAHS*LSWHFLPL--------FLYCFSSILNLFYFVE 310
           FIYL +    N   NY+F + YF   + L++  + +        + YCF  IL   +FVE
Sbjct: 25  FIYLIFTESSNKFGNYRFLLLYFALFN-LTYSVVNIVVPIDIITYRYCFIVILRDGWFVE 83

Query: 309 LNN 301
           L++
Sbjct: 84  LSD 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,596,483
Number of Sequences: 27780
Number of extensions: 344953
Number of successful extensions: 854
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)