Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2090
         (615 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I5P6 Cluster: Putative uncharacterized protein; n=1; ...    34   3.1  
UniRef50_UPI00006CA6B0 Cluster: cation channel family protein; n...    33   5.4  
UniRef50_Q36327 Cluster: Orf262 protein; n=2; Chondrus crispus|R...    33   5.4  
UniRef50_Q24PA5 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q8SXF1 Cluster: RH40482p; n=1; Drosophila melanogaster|...    32   9.4  

>UniRef50_Q8I5P6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 293

 Score = 33.9 bits (74), Expect = 3.1
 Identities = 12/39 (30%), Positives = 24/39 (61%)
 Frame = -1

Query: 609 YLLFVGLSTVITHTYFFQFKCFL*PYWIYRQNEIYSNML 493
           +LL +   T++ + Y    KC + P W+Y+Q +IY +++
Sbjct: 230 FLLTISFITLLINYYLLHIKCLI-PVWLYKQYKIYISLI 267


>UniRef50_UPI00006CA6B0 Cluster: cation channel family protein; n=1;
           Tetrahymena thermophila SB210|Rep: cation channel family
           protein - Tetrahymena thermophila SB210
          Length = 1556

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -1

Query: 420 CFFFVLMNIVFRI*FALPRPLIVCWFICCDYTYILFFNLNVFF 292
           C +FV +N VF++ F    PL++ WFI       +F N+N  +
Sbjct: 277 CLYFVPINFVFKMRFKDIIPLMLGWFIPAFLLVDIFINMNTCY 319


>UniRef50_Q36327 Cluster: Orf262 protein; n=2; Chondrus crispus|Rep:
           Orf262 protein - Chondrus crispus (Carragheen)
          Length = 262

 Score = 33.1 bits (72), Expect = 5.4
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -3

Query: 184 LNRLVFFFQFSK*AGNIFLVIMNIVFLNLVCFTATE*KLLIIFYLHINFVESEFV 20
           +N  +F+F   + A   F +I++ VF  ++CF   +  LLI  Y  + F   +F+
Sbjct: 14  INNSLFYFYSIEIAYRFFYIIISFVFCLIICFWYVQIWLLIETYPFLQFSNKKFI 68


>UniRef50_Q24PA5 Cluster: Putative uncharacterized protein; n=1;
           Desulfitobacterium hafniense Y51|Rep: Putative
           uncharacterized protein - Desulfitobacterium hafniense
           (strain Y51)
          Length = 446

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 21/64 (32%), Positives = 31/64 (48%)
 Frame = +1

Query: 274 GKSNRVKENI*IEKKYVCVITADKPTNNKWSR*SKLNSEYDIH*NKKKTQAYL*IEMIGL 453
           G+ NR+K    +EK Y+ VI +D     KW +   LN  +  H      + YL   + G+
Sbjct: 284 GEDNRLKMWELLEKGYIDVIGSDHCPAEKWEKEVALNDIWKTHYGIPGLEVYLPSLLDGV 343

Query: 454 NKFL 465
           NK L
Sbjct: 344 NKGL 347


>UniRef50_Q8SXF1 Cluster: RH40482p; n=1; Drosophila
           melanogaster|Rep: RH40482p - Drosophila melanogaster
           (Fruit fly)
          Length = 190

 Score = 32.3 bits (70), Expect = 9.4
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = -3

Query: 481 SFFCFLEICLTQSFQFINRLVFFFCFNE 398
           S FC L + LT+ F+F  RL FFFCF+E
Sbjct: 32  SAFCQLLLTLTE-FRFHFRLYFFFCFDE 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,777,549
Number of Sequences: 1657284
Number of extensions: 8673571
Number of successful extensions: 14648
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14641
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)