Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2088
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    40   1e-04
DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted ...    25   1.9  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    23   7.6  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 39.5 bits (88), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
 Frame = +1

Query: 586 PYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPVP----QPYTVEKRSQFQ 732
           PY ++V+V++P ++ +    P  +EK +PY V+ P P    +P+ VE   +F+
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFE 249



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +1

Query: 607 VDKPYEVKVKVPTPYTVEKKIPYEVKVPVPQPYTVEK 717
           V+KPY ++V+ P P  V KK    V  P P P TV K
Sbjct: 228 VEKPYPIEVEKPFPVEVLKKFEVPVPKPYPVPVTVYK 264



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 607 VDKPYEVKVKVPTPYTVEKKIPYEVKVPVPQPYTVE 714
           V  P   KV VP P+ V   +P+ VKV +PQPY ++
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIPQPYPLQ 201



 Score = 35.5 bits (78), Expect = 0.002
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 10/55 (18%)
 Frame = +1

Query: 583 VPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPV----------PQPYTVEK 717
           VP+ V + V  P+ VKV +P PY ++  +   +K+P+          P PYTVEK
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEK 230


>DQ518577-1|ABF66619.1|  318|Anopheles gambiae putative secreted
           carbonic anhydrase protein.
          Length = 318

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 372 AHQNC*GGKEGACSVYSRETRPLY 443
           AHQ+C G  +   +++S    PLY
Sbjct: 48  AHQSCAGAHQSPIAIHSHRAVPLY 71


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 628 KVKVPTPYTVEKKIPYEVKVPVPQPYTV 711
           K  + TP T EK+ P+  K     PY V
Sbjct: 209 KTPLATPPTKEKRKPFFKKQETSSPYDV 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,371
Number of Sequences: 2352
Number of extensions: 12563
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)