Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2088
         (746 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.      33   1.4  
AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.      33   1.4  
EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform ...    31   5.8  
X68044-1|CAA48179.1|  280|Homo sapiens follicle stimulating horm...    30   7.7  
S73199-1|AAB32071.1|   51|Homo sapiens follicle-stimulating horm...    30   7.7  
S59900-1|AAB26480.1|  695|Homo sapiens follicle stimulating horm...    30   7.7  
M95489-1|AAA52478.1|  695|Homo sapiens follicle stimulating horm...    30   7.7  
M65085-1|AAA52477.1|  695|Homo sapiens follicle stimulating horm...    30   7.7  
BC125270-1|AAI25271.1|  669|Homo sapiens FSHR protein protein.         30   7.7  
BC118548-1|AAI18549.1|  695|Homo sapiens follicle stimulating ho...    30   7.7  
BC096831-1|AAH96831.1|  695|Homo sapiens follicle stimulating ho...    30   7.7  
AY429104-1|AAR07899.1|  695|Homo sapiens follicle stimulating ho...    30   7.7  
AC092533-1|AAX88895.1|   51|Homo sapiens unknown protein.              30   7.7  

>BC117331-1|AAI17332.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 419 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 571
           Q+R  +P  +R    +R   P  +PTPL+   P+ +R    T    L+P+P
Sbjct: 4   QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSP 54


>AY324825-1|AAP85542.1|  346|Homo sapiens selenoprotein V protein.
          Length = 346

 Score = 32.7 bits (71), Expect = 1.4
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = +2

Query: 419 QSRNTSPIPSRRKYPMR*KCPYLSPTPLKRKFPLPSRNTSNTQYTYLSPTP 571
           Q+R  +P  +R    +R   P  +PTPL+   P+ +R    T    L+P+P
Sbjct: 4   QARTPAPSSARTSTSVRASTPTRTPTPLRTPTPVRTRTPIRTLTPVLTPSP 54


>EF212155-1|ABN05231.1|  391|Homo sapiens cellular titin isoform
           PEVK variant 3 protein.
          Length = 391

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 19/34 (55%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
 Frame = +1

Query: 622 EVKVKVPTPYTVE---KKIPYEVKVPVPQPYTVE 714
           EVK KVP P  V    KK   E KVPVP P  VE
Sbjct: 217 EVKPKVPVPAPVPEVPKKPVQEKKVPVPAPKKVE 250


>X68044-1|CAA48179.1|  280|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLRLGSGCHHRICHCSNRVFLC 32


>S73199-1|AAB32071.1|   51|Homo sapiens follicle-stimulating
          hormone receptor protein.
          Length = 51

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>S59900-1|AAB26480.1|  695|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>M95489-1|AAA52478.1|  695|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>M65085-1|AAA52477.1|  695|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>BC125270-1|AAI25271.1|  669|Homo sapiens FSHR protein protein.
          Length = 669

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>BC118548-1|AAI18549.1|  695|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>BC096831-1|AAH96831.1|  695|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>AY429104-1|AAR07899.1|  695|Homo sapiens follicle stimulating
          hormone receptor protein.
          Length = 695

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


>AC092533-1|AAX88895.1|   51|Homo sapiens unknown protein.
          Length = 51

 Score = 30.3 bits (65), Expect = 7.7
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 87 AFLLLGKGNHGQRCHQNNRVLHC 19
          AFL LG G H + CH +NRV  C
Sbjct: 10 AFLSLGSGCHHRICHCSNRVFLC 32


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.136    0.410 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,916,978
Number of Sequences: 237096
Number of extensions: 1867279
Number of successful extensions: 5217
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5205
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)