Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2086
         (763 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    23   3.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    23   3.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.1  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   8.1  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 350 RPATTPSATGY*TSESGCRHEPWQPTASRSPNRTLSNAS 466
           RP +TPSA G    ++  +   W P  S S  +  +  S
Sbjct: 414 RPPSTPSADGSKPVQTTPKPGQWVPEKSTSTTQRTTTVS 452


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 63   LVYMQA*LENNVSQIQASVKYLVCCMMLTHHRDNR 167
            L ++ A  +++   ++ SV  L  CM+ T+  DN+
Sbjct: 1063 LTFLGANAQDDEGGLEFSVNKLFKCMICTYKADNK 1097


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = +3

Query: 63   LVYMQA*LENNVSQIQASVKYLVCCMMLTHHRDNR 167
            L ++ A  +++   ++ SV  L  CM+ T+  DN+
Sbjct: 1063 LTFLGANAQDDEGGLEFSVNKLFKCMICTYKADNK 1097


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 474 LNENEPQWWRKM 509
           L EN+P WW+++
Sbjct: 90  LIENKPNWWQEL 101


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 474 LNENEPQWWRKM 509
           L EN+P WW+++
Sbjct: 90  LIENKPNWWQEL 101


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +3

Query: 267  GAVIVFQLKCTKSHVCQSHVKYLVFCDS 350
            GA++ F   C  + +    +    FCD+
Sbjct: 1034 GAILAFSWACNDAVMTSDSIMKCAFCDT 1061


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 465 LWKLNENEPQWWRKM 509
           L  L +N+P WW+++
Sbjct: 87  LHHLIKNKPNWWQEL 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,613
Number of Sequences: 336
Number of extensions: 4532
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)