SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2086
         (763 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150206-1|AAI50207.1| 1288|Homo sapiens 5-oxoprolinase (ATP-hyd...    56   1e-07
BC142672-1|AAI42673.1| 1288|Homo sapiens 5-oxoprolinase (ATP-hyd...    56   1e-07
AB122018-1|BAD13434.1| 1288|Homo sapiens 5-oxo-L-prolinase protein.    56   1e-07
BX537998-1|CAD97954.1| 1263|Homo sapiens hypothetical protein pr...    33   1.5  
AK092284-1|BAC03850.1|  885|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform p...    33   1.5  
AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.              33   1.5  
D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.               30   7.8  
BC094882-1|AAH94882.1|  739|Homo sapiens DKFZp547E087 protein pr...    30   7.8  
BC073943-1|AAH73943.1|  361|Homo sapiens DKFZp547E087 protein pr...    30   7.8  
BC061522-1|AAH61522.1|  420|Homo sapiens DKFZp547E087 protein pr...    30   7.8  
BC036263-1|AAH36263.1|  678|Homo sapiens LOC23117 protein protein.     30   7.8  
AK128772-1|BAC87606.1|  834|Homo sapiens protein ( Homo sapiens ...    30   7.8  
AB209632-1|BAD92869.1|  854|Homo sapiens PI-3-kinase-related kin...    30   7.8  

>BC150206-1|AAI50207.1| 1288|Homo sapiens 5-oxoprolinase
           (ATP-hydrolysing) protein.
          Length = 1288

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 621 FNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
           F+GS A+LSGPAGGV+GY+ T+YQ+E G PVIG + G TS
Sbjct: 280 FSGSSAVLSGPAGGVVGYSATTYQQEGGQPVIGFDMGGTS 319


>BC142672-1|AAI42673.1| 1288|Homo sapiens 5-oxoprolinase
           (ATP-hydrolysing) protein.
          Length = 1288

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 621 FNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
           F+GS A+LSGPAGGV+GY+ T+YQ+E G PVIG + G TS
Sbjct: 280 FSGSSAVLSGPAGGVVGYSATTYQQEGGQPVIGFDMGGTS 319


>AB122018-1|BAD13434.1| 1288|Homo sapiens 5-oxo-L-prolinase protein.
          Length = 1288

 Score = 56.4 bits (130), Expect = 1e-07
 Identities = 26/40 (65%), Positives = 33/40 (82%), Gaps = 1/40 (2%)
 Frame = -2

Query: 621 FNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
           F+GS A+LSGPAGGV+GY+ T+YQ+E G PVIG + G TS
Sbjct: 280 FSGSSAVLSGPAGGVVGYSATTYQQEGGQPVIGFDMGGTS 319


>BX537998-1|CAD97954.1| 1263|Homo sapiens hypothetical protein
           protein.
          Length = 1263

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 475 SMRMSRSGGERCFPILTYDRQASFFLVRGHSV-TNHASSWPREDGARAVESTEYEKLIT 648
           S  +  SG E+C+  +    +ASF  + G  + T+ + + P+ D A   E+ E E  +T
Sbjct: 507 STNIHASGEEKCYEEVQVQNEASFSTLEGEMIETSFSQNIPKLDEAHTTEAAESETSLT 565


>AK092284-1|BAC03850.1|  885|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34965 fis, clone NTONG2004308. ).
          Length = 885

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 475 SMRMSRSGGERCFPILTYDRQASFFLVRGHSV-TNHASSWPREDGARAVESTEYEKLIT 648
           S  +  SG E+C+  +    +ASF  + G  + T+ + + P+ D A   E+ E E  +T
Sbjct: 162 STNIHASGEEKCYEEVQVQNEASFSTLEGEMIETSFSQNIPKLDEAHTTEAAESETSLT 220


>AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform
            protein.
          Length = 5604

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 475  SMRMSRSGGERCFPILTYDRQASFFLVRGHSV-TNHASSWPREDGARAVESTEYEKLIT 648
            S  +  SG E+C+  +    +ASF  + G  + T+ + + P+ D A   E+ E E  +T
Sbjct: 4848 STNIHASGEEKCYEEVQVQNEASFSTLEGEMIETSFSQNIPKLDEAHTTEAAESETSLT 4906


>AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.
          Length = 5604

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +1

Query: 475  SMRMSRSGGERCFPILTYDRQASFFLVRGHSV-TNHASSWPREDGARAVESTEYEKLIT 648
            S  +  SG E+C+  +    +ASF  + G  + T+ + + P+ D A   E+ E E  +T
Sbjct: 4848 STNIHASGEEKCYEEVQVQNEASFSTLEGEMIETSFSQNIPKLDEAHTTEAAESETSLT 4906


>D86974-1|BAA13210.2|  884|Homo sapiens KIAA0220 protein.
          Length = 884

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 788 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 826


>BC094882-1|AAH94882.1|  739|Homo sapiens DKFZp547E087 protein
           protein.
          Length = 739

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 643 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 681


>BC073943-1|AAH73943.1|  361|Homo sapiens DKFZp547E087 protein
           protein.
          Length = 361

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 265 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 303


>BC061522-1|AAH61522.1|  420|Homo sapiens DKFZp547E087 protein
           protein.
          Length = 420

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 324 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 362


>BC036263-1|AAH36263.1|  678|Homo sapiens LOC23117 protein protein.
          Length = 678

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 582 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 620


>AK128772-1|BAC87606.1|  834|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45371 fis, clone BRHIP3017855, highly  similar
           to Homo sapiens nuclear pore complex interacting protein
           (NPIP). ).
          Length = 834

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 738 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 776


>AB209632-1|BAD92869.1|  854|Homo sapiens PI-3-kinase-related kinase
           SMG-1 isoform 1homolog protein.
          Length = 854

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 7/39 (17%)
 Frame = +3

Query: 354 PPQPHRQQV--IE-----RVRVAADMNPGNPQPADRRIG 449
           PP+P R++V  +E     + R AAD+ P +P+P  RR+G
Sbjct: 758 PPEPKRRRVGDVEPSRKPKRRRAADVEPSSPEPKRRRVG 796


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,443,923
Number of Sequences: 237096
Number of extensions: 2949958
Number of successful extensions: 5433
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5164
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5433
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -