Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2086
         (763 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024193-1|ABC86255.1| 1294|Drosophila melanogaster RH09675p pro...    51   2e-06
AY119106-1|AAM50966.1| 1294|Drosophila melanogaster RE08455p pro...    51   2e-06
AE013599-3403|AAF46852.2| 1294|Drosophila melanogaster CG4752-PA...    51   2e-06
AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.    30   4.0  
AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-P...    30   4.0  

>BT024193-1|ABC86255.1| 1294|Drosophila melanogaster RH09675p
           protein.
          Length = 1294

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
 Frame = -2

Query: 621 FNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
           F G+RAILSGPAGGV+GYA+T   +ET LP+IG + G TS
Sbjct: 282 FRGARAILSGPAGGVVGYALTG-ARETELPLIGFDMGGTS 320


>AY119106-1|AAM50966.1| 1294|Drosophila melanogaster RE08455p
           protein.
          Length = 1294

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
 Frame = -2

Query: 621 FNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
           F G+RAILSGPAGGV+GYA+T   +ET LP+IG + G TS
Sbjct: 282 FRGARAILSGPAGGVVGYALTG-ARETELPLIGFDMGGTS 320


>AE013599-3403|AAF46852.2| 1294|Drosophila melanogaster CG4752-PA
           protein.
          Length = 1294

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
 Frame = -2

Query: 621 FNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
           F G+RAILSGPAGGV+GYA+T   +ET LP+IG + G TS
Sbjct: 282 FRGARAILSGPAGGVVGYALTG-ARETELPLIGFDMGGTS 320


>AY166585-1|AAN86032.1|  990|Drosophila melanogaster HAMLET protein.
          Length = 990

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +3

Query: 285 QLKCTKSH----VCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNPGNPQP 431
           Q+KC K +       S  K+  FCDS  P P+R Q + R       +P   QP
Sbjct: 365 QIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRNQHVNRHHQHPHQHPLPHQP 417


>AE014134-2973|AAF53703.3| 1108|Drosophila melanogaster CG31753-PA
           protein.
          Length = 1108

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +3

Query: 285 QLKCTKSH----VCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNPGNPQP 431
           Q+KC K +       S  K+  FCDS  P P+R Q + R       +P   QP
Sbjct: 483 QIKCDKCNQSFSTLTSLTKHKKFCDSTGPGPYRNQHVNRHHQHPHQHPLPHQP 535


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,645,451
Number of Sequences: 53049
Number of extensions: 882726
Number of successful extensions: 2436
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)