Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2086
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical... 50 1e-06
U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans Phosphodieste... 29 3.6
AC024877-3|AAF60898.1| 760|Caenorhabditis elegans Phosphodieste... 29 3.6
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 29 4.8
U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF000198-5|AAB53053.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.8
AC025723-1|AAK29934.1| 184|Caenorhabditis elegans Hypothetical ... 29 4.8
Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical pr... 28 6.3
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 6.3
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 6.3
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 28 6.3
Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical p... 28 8.3
Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF016685-6|AAG24147.1| 338|Caenorhabditis elegans Seven tm rece... 28 8.3
AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical... 28 8.3
>AC025715-10|ABJ99061.1| 1187|Caenorhabditis elegans Hypothetical
protein Y38F2AR.12a protein.
Length = 1187
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = -2
Query: 624 RFNGSRAILSGPAGGVIGYAMTSYQKETGLPVIG-EYGETS 505
+F GSRAILSGPAGGV+G A T+Y+ PVIG + G TS
Sbjct: 279 KFRGSRAILSGPAGGVVGIASTAYKASDKKPVIGFDMGGTS 319
>U13071-4|AAA20671.1| 510|Caenorhabditis elegans Hypothetical
protein T22F7.1 protein.
Length = 510
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +2
Query: 113 ICQISCVLYDAYPSQRQSILVM*AVSTFQIVSMGTILPRFTVIYVKVLLQGWCSDRVSVE 292
I Q+ V+ D + R+ I+++ + T + S+G++ P F ++ V +QG C ++
Sbjct: 143 IGQLFAVVADRFG--RRPIIIICLLLTGIVGSLGSLAPNFPLLLVARFIQGSCYTPLTTV 200
Query: 293 MY*IPCLSIP 322
Y + SIP
Sbjct: 201 NYVLSGESIP 210
>AC024877-4|ABQ13047.1| 697|Caenorhabditis elegans
Phosphodiesterase protein 6, isoformb protein.
Length = 697
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 406 SAATLTRSITCCRWGCGGSLSQN 338
+AA +R + RW CGGS S+N
Sbjct: 46 TAAAASRPVFAMRWCCGGSYSEN 68
>AC024877-3|AAF60898.1| 760|Caenorhabditis elegans
Phosphodiesterase protein 6, isoforma protein.
Length = 760
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 406 SAATLTRSITCCRWGCGGSLSQN 338
+AA +R + RW CGGS S+N
Sbjct: 46 TAAAASRPVFAMRWCCGGSYSEN 68
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 4469 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 4526
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 4576 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 4633
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 562 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 619
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 4458 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 4515
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 4469 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 4526
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 4576 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 4633
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 562 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 619
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 246 SKSSFKGGAVI-VFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNP 416
SKS +G I K K + ++HV++ V SD H ++ + + A MNP
Sbjct: 4458 SKSVTQGNRTIETITYKTEKDGIVETHVEHRVTIHSDGDIDHDAELSQAILEATQMNP 4515
>U41553-1|AAA83291.1| 1250|Caenorhabditis elegans Hypothetical
protein ZK1193.2 protein.
Length = 1250
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 294 CTKSH--VCQSHVKYLVFCDSDPPQPHRQQVIERVRVAAD 407
CTK + VCQ H + SDP H + I ++RV A+
Sbjct: 375 CTKKYYFVCQKHAYSADYSPSDPEINHLSRGIWKIRVRAN 414
>AF000198-5|AAB53053.1| 381|Caenorhabditis elegans Hypothetical
protein T28F2.1 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 273 VIVFQLKCTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNPGN 422
+++FQ + + + LV+CD +P HR + V + D GN
Sbjct: 28 IVIFQWM-VPGYYDYNQISTLVYCDKNPSDQHRYLLFPMVTIVFDGGLGN 76
>AC025723-1|AAK29934.1| 184|Caenorhabditis elegans Hypothetical
protein Y54F10AM.7 protein.
Length = 184
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 377 LLPMGLWRVAVTKHKIFDMGLTNMGFSTFQLKHDHCTTL 261
L MGL V +T + MGLT MG +T L TT+
Sbjct: 83 LTTMGLTTVGLTTMGLTTMGLTTMGLATMGLTTKGLTTV 121
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 377 LLPMGLWRVAVTKHKIFDMGLTNMGFSTFQLKHDHCTTL 261
L MGL + +T + MGLT MG ST L TT+
Sbjct: 53 LTTMGLTTMGLTTMGLATMGLTTMGLSTIGLTTMGLTTV 91
>Z82079-1|CAB04949.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 36 DRRSKCCSELVYMQA*LENNVSQIQASVKYLVCCMMLTHH 155
D SKC + LV + L+N S++ A +L CMM T +
Sbjct: 852 DTLSKCYNRLVVLSKDLDNVNSRLSAVEVFLRLCMMDTRY 891
>Z80344-7|CAB02491.1| 1529|Caenorhabditis elegans Hypothetical
protein F15D4.1 protein.
Length = 1529
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 36 DRRSKCCSELVYMQA*LENNVSQIQASVKYLVCCMMLTHH 155
D SKC + LV + L+N S++ A +L CMM T +
Sbjct: 852 DTLSKCYNRLVVLSKDLDNVNSRLSAVEVFLRLCMMDTRY 891
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 294 CTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNPGNPQPADRRIGLFLMHLWK 473
C VC+ + DP P + +VA G QP+ RR+G+ + WK
Sbjct: 143 CKAKSVCEGAAEKEEGMPDDPDDPMN----DGKKVAGGC--GRYQPSYRRVGIDINAEWK 196
Query: 474 LNENEPQWWRKM 509
N NE RK+
Sbjct: 197 KNVNEDTQERKI 208
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +3
Query: 294 CTKSHVCQSHVKYLVFCDSDPPQPHRQQVIERVRVAADMNPGNPQPADRRIGLFLMHLWK 473
C VC+ + DP P + +VA G QP+ RR+G+ + WK
Sbjct: 143 CKAKSVCEGAAEKEEGMPDDPDDPMN----DGKKVAGGC--GRYQPSYRRVGIDINAEWK 196
Query: 474 LNENEPQWWRKM 509
N NE RK+
Sbjct: 197 KNVNEDTQERKI 208
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 122 ISCVLYDAYPSQRQSILVM*AVSTFQIVSMGTILPRFTVIYVKVLL 259
ISCV+ A S R S+ + ST+ ++ M +L T + + +L+
Sbjct: 118 ISCVIISACTSMRTSVTYLLIFSTYSLLPMSFMLMILTRVMMVILV 163
>Z82090-6|CAB51468.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 574 WLRYDLVPERNWPAGHR*VWGNIFLH-HCGSFSLSFQR-CIRKSPI--RRSAGCGL 419
W RY + E++W GH +WG F + G F+ C+ + + ++S+GC L
Sbjct: 16 WARYCVHNEKSWCQGHN-IWGWCFHNKSSGVFNCDDNAFCVSQEQLKNKKSSGCFL 70
>Z81526-10|CAB51464.1| 278|Caenorhabditis elegans Hypothetical
protein ZK337.5 protein.
Length = 278
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -1
Query: 574 WLRYDLVPERNWPAGHR*VWGNIFLH-HCGSFSLSFQR-CIRKSPI--RRSAGCGL 419
W RY + E++W GH +WG F + G F+ C+ + + ++S+GC L
Sbjct: 16 WARYCVHNEKSWCQGHN-IWGWCFHNKSSGVFNCDDNAFCVSQEQLKNKKSSGCFL 70
>Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical
protein T28B8.5 protein.
Length = 527
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = -1
Query: 499 HHCGSFSLS--FQRCIRKSPIRRSAGCGLPGFMSAATLTRSITC 374
H+ G++++ F+ C+++ I S GC P + A+ T+ ++C
Sbjct: 283 HYTGTYTVEACFRSCMQEKIIA-SCGCYYPAYSHASNTTQYVSC 325
>AF016685-6|AAG24147.1| 338|Caenorhabditis elegans Seven tm
receptor protein 84 protein.
Length = 338
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -3
Query: 110 LNLANVIFKLSLHIYKFRTTFGPSVY 33
++LA+ IF L L I+K R +FGP Y
Sbjct: 20 ISLASEIFLLLLIIFKTRASFGPYKY 45
>AC084158-18|AAK68583.1| 300|Caenorhabditis elegans Hypothetical
protein Y69A2AR.9 protein.
Length = 300
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +2
Query: 389 SESGCRHEPWQPTASRSPNRTLSNASLETQ 478
++ G RH Q SR N T NASLE +
Sbjct: 50 AQQGMRHPSLQSKGSRGTNGTQKNASLEDE 79
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,317,762
Number of Sequences: 27780
Number of extensions: 435013
Number of successful extensions: 1034
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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