Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2085
         (740 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124118-1|BAC85777.1|  157|Homo sapiens protein ( Homo sapiens ...    32   2.5  
AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.     31   3.3  
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.             31   4.3  

>AK124118-1|BAC85777.1|  157|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42124 fis, clone TESTI2009477, weakly  similar
           to TRICHOHYALIN. ).
          Length = 157

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -1

Query: 599 RPQQGQNRRHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEEMRLYRQQ 456
           R Q+ Q R+ +     ++ Q+  +   +R+Q  Q GE++E+MR   +Q
Sbjct: 64  RKQEEQVRKQEEQMWKQEEQMRKQEEQMRKQEKQMGEQEEQMRKREEQ 111


>AB040958-1|BAA96049.2| 1135|Homo sapiens KIAA1525 protein protein.
          Length = 1135

 Score = 31.5 bits (68), Expect = 3.3
 Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
 Frame = -2

Query: 715  GKNQRQQYEPVITDISSM---NTSF-LCAGQ*STT*PKSGFAVAHSRGRIAVTIPIAAGV 548
            G   RQ+ EP+  D+       + F L A + ++T P      AH RGR AV   +  G+
Sbjct: 1018 GHLHRQKNEPIHLDVVEQPPQRSDFPLAAPENASTGP------AHVRGRTAVETDLTFGL 1071

Query: 547  TPSCRPNTFICGNSGP 500
            TP+ RP+   C +  P
Sbjct: 1072 TPN-RPSLSACSSEAP 1086


>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
          Length = 6620

 Score = 31.1 bits (67), Expect = 4.3
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 586  GRIAVTIPIAAGVTPSCRPNTFICGNSGPRAAKK 485
            G +  T+ +A  ++P+C    + CGN+ PR  K+
Sbjct: 1820 GELGGTVTLACELSPACAEVVWRCGNTQPRVGKR 1853


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,803,428
Number of Sequences: 237096
Number of extensions: 2113564
Number of successful extensions: 4450
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4447
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)