Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2085
         (740 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY121685-1|AAM52012.1|  539|Drosophila melanogaster RE36877p pro...    75   1e-13
AE013599-2222|AAF58040.2|  539|Drosophila melanogaster CG15706-P...    75   1e-13
BT003244-1|AAO25001.1|  588|Drosophila melanogaster LD37218p pro...    50   3e-06
AE014296-2002|AAF50028.1|  575|Drosophila melanogaster CG7334-PA...    50   3e-06
AE014296-2001|AAS65032.1|  596|Drosophila melanogaster CG7334-PB...    50   3e-06
AY069628-1|AAL39773.1|  478|Drosophila melanogaster LD39967p pro...    34   0.23 
AE014296-1224|AAF50582.1|  478|Drosophila melanogaster CG8602-PA...    34   0.23 
AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-P...    33   0.41 
BT025091-1|ABE73262.1|  464|Drosophila melanogaster IP12824p pro...    32   0.94 
AE014134-781|AAF50974.2|  485|Drosophila melanogaster CG12194-PA...    32   0.94 
AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-P...    31   2.2  
BT023913-1|ABA81847.1|  284|Drosophila melanogaster AT13385p pro...    29   5.0  
BT012336-1|AAS77461.1|  284|Drosophila melanogaster AT16075p pro...    29   5.0  
AE013599-633|AAM68841.1|  284|Drosophila melanogaster CG30366-PA...    29   5.0  

>AY121685-1|AAM52012.1|  539|Drosophila melanogaster RE36877p
           protein.
          Length = 539

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 32/67 (47%), Positives = 48/67 (71%)
 Frame = +3

Query: 516 QMNVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTGSY 695
           Q++V G+Q+GV P  MG +TA LPLL+  AKPL G++ DY+ + RK +F+ LI +MT ++
Sbjct: 28  QLSVIGKQIGVPPDVMGYITAALPLLYVLAKPLVGFLADYFTSLRKFIFISLILIMTLAF 87

Query: 696 CCLWFLP 716
              +FLP
Sbjct: 88  AGFYFLP 94


>AE013599-2222|AAF58040.2|  539|Drosophila melanogaster CG15706-PA
           protein.
          Length = 539

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 32/67 (47%), Positives = 48/67 (71%)
 Frame = +3

Query: 516 QMNVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTGSY 695
           Q++V G+Q+GV P  MG +TA LPLL+  AKPL G++ DY+ + RK +F+ LI +MT ++
Sbjct: 28  QLSVIGKQIGVPPDVMGYITAALPLLYVLAKPLVGFLADYFTSLRKFIFISLILIMTLAF 87

Query: 696 CCLWFLP 716
              +FLP
Sbjct: 88  AGFYFLP 94


>BT003244-1|AAO25001.1|  588|Drosophila melanogaster LD37218p
           protein.
          Length = 588

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +3

Query: 519 MNVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTG-SY 695
           M     QLG +PA +G +  ILP++   AKPLFGY+ D +  HR L   L   V+TG ++
Sbjct: 30  MPTLAGQLGYSPAVVGTMYTILPIIGMLAKPLFGYIADRYHRHRPL--FLGGQVLTGIAF 87

Query: 696 CCLWFLPTPETVEP 737
             + F+P  E   P
Sbjct: 88  FLIMFVPGMEKPLP 101


>AE014296-2002|AAF50028.1|  575|Drosophila melanogaster CG7334-PA,
           isoform A protein.
          Length = 575

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +3

Query: 519 MNVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTG-SY 695
           M     QLG +PA +G +  ILP++   AKPLFGY+ D +  HR L   L   V+TG ++
Sbjct: 1   MPTLAGQLGYSPAVVGTMYTILPIIGMLAKPLFGYIADRYHRHRPL--FLGGQVLTGIAF 58

Query: 696 CCLWFLPTPETVEP 737
             + F+P  E   P
Sbjct: 59  FLIMFVPGMEKPLP 72


>AE014296-2001|AAS65032.1|  596|Drosophila melanogaster CG7334-PB,
           isoform B protein.
          Length = 596

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = +3

Query: 519 MNVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTG-SY 695
           M     QLG +PA +G +  ILP++   AKPLFGY+ D +  HR L   L   V+TG ++
Sbjct: 1   MPTLAGQLGYSPAVVGTMYTILPIIGMLAKPLFGYIADRYHRHRPL--FLGGQVLTGIAF 58

Query: 696 CCLWFLPTPETVEP 737
             + F+P  E   P
Sbjct: 59  FLIMFVPGMEKPLP 72


>AY069628-1|AAL39773.1|  478|Drosophila melanogaster LD39967p
           protein.
          Length = 478

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = +3

Query: 522 NVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTGSYCC 701
           N F  + G++PA    V +++ L+ A + P+FG+++D    +   VF   ++ + G++  
Sbjct: 296 NFFVDRFGLSPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFTATLTTI-GAHAL 354

Query: 702 LWF 710
           L F
Sbjct: 355 LTF 357


>AE014296-1224|AAF50582.1|  478|Drosophila melanogaster CG8602-PA
           protein.
          Length = 478

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 17/63 (26%), Positives = 35/63 (55%)
 Frame = +3

Query: 522 NVFGRQLGVTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTGSYCC 701
           N F  + G++PA    V +++ L+ A + P+FG+++D    +   VF   ++ + G++  
Sbjct: 296 NFFVDRFGLSPAEANTVDSLVYLIAAVSSPVFGFIIDKLGRNVTWVFTATLTTI-GAHAL 354

Query: 702 LWF 710
           L F
Sbjct: 355 LTF 357


>AE014297-3191|AAO41590.1| 1480|Drosophila melanogaster CG31158-PB,
           isoform B protein.
          Length = 1480

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -1

Query: 593 QQGQNRRHDSHRCGRDSQLPPEHIHLRQQRPQGGEEKEEMRLYRQQAFVNLHFMQISLS 417
           QQ Q + H  H   +  QL  +H    QQ+ Q  +++++ +LY QQ+  N H   IS S
Sbjct: 722 QQQQQQLHQQH-LQQQQQLQQQH----QQQQQQQQQQQQQQLYGQQSHSNSHSSSISSS 775


>BT025091-1|ABE73262.1|  464|Drosophila melanogaster IP12824p
           protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 546 VTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTGSY 695
           +TP     V +I+ L+ A A PLFG+V+D    +   VF   IS +   +
Sbjct: 278 MTPDEANTVNSIVYLISAIASPLFGFVIDKVGRNVTWVFCATISTLLAHF 327


>AE014134-781|AAF50974.2|  485|Drosophila melanogaster CG12194-PA
           protein.
          Length = 485

 Score = 31.9 bits (69), Expect = 0.94
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +3

Query: 546 VTPAAMGIVTAILPLLWATAKPLFGYVVDYWPAHRKLVFMLLISVMTGSY 695
           +TP     V +I+ L+ A A PLFG+V+D    +   VF   IS +   +
Sbjct: 310 MTPDEANTVNSIVYLISAIASPLFGFVIDKVGRNVTWVFCATISTLLAHF 359


>AE014134-1761|AAF52856.2| 1424|Drosophila melanogaster CG31714-PA
           protein.
          Length = 1424

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 558 AMGIVTAILPLLWATAKPLFGYVVDYWPAH 647
           A+GI + +LPLL+A A PL   ++  WP H
Sbjct: 754 AIGI-SWLLPLLFAVAAPLICSIIGQWPRH 782


>BT023913-1|ABA81847.1|  284|Drosophila melanogaster AT13385p
           protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
 Frame = +1

Query: 433 IK*RLTKACCL*R----RISSFSSPPW-GRC-----CRK*MCSGGNWESRPQRWES*RRF 582
           +K RL K CCL       I     PP  G C      R+ +C+ G WE  P R +  + F
Sbjct: 156 VKKRLKKVCCLDAIEPPEILYRIRPPCPGTCQINYKARRLLCADGEWERDPTR-KCPKFF 214

Query: 583 CPCC 594
            PCC
Sbjct: 215 HPCC 218


>BT012336-1|AAS77461.1|  284|Drosophila melanogaster AT16075p
           protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
 Frame = +1

Query: 433 IK*RLTKACCL*R----RISSFSSPPW-GRC-----CRK*MCSGGNWESRPQRWES*RRF 582
           +K RL K CCL       I     PP  G C      R+ +C+ G WE  P R +  + F
Sbjct: 156 VKKRLKKVCCLDAIEPPEILYRIRPPCPGTCQINYKARRLLCADGEWERDPTR-KCPKFF 214

Query: 583 CPCC 594
            PCC
Sbjct: 215 HPCC 218


>AE013599-633|AAM68841.1|  284|Drosophila melanogaster CG30366-PA
           protein.
          Length = 284

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
 Frame = +1

Query: 433 IK*RLTKACCL*R----RISSFSSPPW-GRC-----CRK*MCSGGNWESRPQRWES*RRF 582
           +K RL K CCL       I     PP  G C      R+ +C+ G WE  P R +  + F
Sbjct: 156 VKKRLKKVCCLDAIEPPEILYRIRPPCPGTCQINYKARRLLCADGEWERDPTR-KCPKFF 214

Query: 583 CPCC 594
            PCC
Sbjct: 215 HPCC 218


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,590,176
Number of Sequences: 53049
Number of extensions: 655673
Number of successful extensions: 1941
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)