Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2079
         (792 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.098
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.9  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.098
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -3

Query: 454 ATVIFINCVLFCCSFRFLCVHF*ILFF*LLT*VDELTAHLV 332
           A +IF   +LFCC+F F  +H  +LF   L  +D  T HL+
Sbjct: 172 AFIIFTMHLLFCCAFIFFNMH--LLF---LLCLDYFTLHLL 207


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 228 GGAAVVTILETLELISQGGWRI 293
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 736 IITYSWHGTTEKRSG 692
           ++TY +HG  E+++G
Sbjct: 831 VMTYDYHGAWERQTG 845



 Score = 21.4 bits (43), Expect = 8.5
 Identities = 6/15 (40%), Positives = 12/15 (80%)
 Frame = -3

Query: 736  IITYSWHGTTEKRSG 692
            ++TY +HG  +K++G
Sbjct: 1587 VMTYDFHGQWDKQTG 1601


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -2

Query: 62  FSNLLKACIICMYLIKSCY 6
           +  L KAC  C Y  + CY
Sbjct: 66  YHTLSKACYDCPYNTQDCY 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,295
Number of Sequences: 336
Number of extensions: 4077
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21480183
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)