Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2076
         (783 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    27   0.22 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   4.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   6.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 654 FCRLLMLLRGRFGVIHGGVHII 719
           F  LLM+L GRF VI+ G+  +
Sbjct: 189 FLTLLMILEGRFRVINDGIQAL 210


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 3/27 (11%)
 Frame = +3

Query: 612 YAATLTCWREA---SPLFCRLLMLLRG 683
           YA  L CW+E     P F  L   L G
Sbjct: 724 YAVMLNCWKECPKNRPTFTELSKSLEG 750


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +1

Query: 202 RGWRDFGRSYFKRYGHAAR 258
           RG+ DF R + + Y  A R
Sbjct: 204 RGYEDFRRDFLRTYWSAKR 222


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 659 PSSDVAERKVWRHPW 703
           P +D     VW HPW
Sbjct: 534 PLTDTIPIHVWIHPW 548


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,366
Number of Sequences: 336
Number of extensions: 3757
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)