Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2076
(783 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93239-1|CAB07528.1| 512|Caenorhabditis elegans Hypothetical pr... 245 3e-65
Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical pr... 36 0.033
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 30 2.1
AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical... 29 3.7
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 3.7
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr... 29 5.0
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 29 5.0
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 29 5.0
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 29 5.0
AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical ... 29 5.0
Z92973-1|CAB07493.2| 323|Caenorhabditis elegans Hypothetical pr... 28 6.6
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 6.6
U40933-2|AAL27242.1| 158|Caenorhabditis elegans Hypothetical pr... 28 8.7
>Z93239-1|CAB07528.1| 512|Caenorhabditis elegans Hypothetical
protein H03A11.1 protein.
Length = 512
Score = 245 bits (599), Expect = 3e-65
Identities = 111/208 (53%), Positives = 144/208 (69%), Gaps = 2/208 (0%)
Frame = +2
Query: 158 NLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKEGGTQLKLIIDYPNGVQALF 337
N E+F I +Y D + +++ +L D+ T P+ H +GGTQ+K + + N QA+F
Sbjct: 133 NWERFYSNIGSCSVYSDDQ-MIDNLLHDLNTSPIKHVHIMDGGTQVKFVFTFKNDKQAVF 191
Query: 338 KPMRFARDVQTLPNHFYFSDYERHNAEIAAFHLDRILGFRRAMPVVGRVLNMTTEIYDVT 517
KPMRF RD ++ PNHFYFSD+ERH+AEIA FHLDR+LGFRRA+P VGRVLNMTTE+++
Sbjct: 192 KPMRFGRDYESDPNHFYFSDFERHHAEIATFHLDRVLGFRRAIPTVGRVLNMTTELFEKA 251
Query: 518 EGDILKTFFVSPANNFCFHGKCSYYCDTGHAICGNPDMLEGSFAAFLPSSDVAERKVWRH 697
E + KTFF SPA NFCF +C YYCDT HAICG PDM EGS FLP RK R
Sbjct: 252 EKKLKKTFFFSPAKNFCFVSRCDYYCDTTHAICGLPDMKEGSVQVFLPDESAVPRKHNRS 311
Query: 698 PWRRSYHKRRK-AQWELQSDYC-DTVRT 775
P+RR+Y K+ + A+W+ +YC D V+T
Sbjct: 312 PYRRTYSKKNQVAEWQSSMNYCTDKVKT 339
>Z92825-6|CAB07314.2| 435|Caenorhabditis elegans Hypothetical
protein C13C4.3 protein.
Length = 435
Score = 35.9 bits (79), Expect = 0.033
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = -2
Query: 773 SVPYHSNRTAAPIALSCAYDMNASMDDAKPSSQQHQKTAKKRRSFPPTCQGCR 615
+VP S + +P L +M+ +++D+KPSS ++QK R + P C+ CR
Sbjct: 7 TVPSTSEKCLSPELL--LPNMDENLEDSKPSSLKYQKAMMSRGTCPSNCKVCR 57
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 275 KEGGTQLKLIIDYPNGVQALFKPMRFARD 361
K T K+ +DYPN +LF P RF ++
Sbjct: 46 KTWSTNNKITVDYPNRFTSLFTPKRFYKE 74
>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
protein Y43F8B.3b protein.
Length = 1398
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 557 NNFCFHGKCSYYCDTGHAICGNPDMLEGSFAAFLPSSDVAERKVWRH 697
NNF C+ CD C P L + + SSD +W H
Sbjct: 733 NNFLTQEDCAATCDVFTNPCNQPIALPATLCSGTGSSDTCGANMWCH 779
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 557 NNFCFHGKCSYYCDTGHAICGNPDMLEGSFAAFLPSSDVAERKVWRH 697
NNF C+ CD C P L + + SSD +W H
Sbjct: 1151 NNFLTQEDCAATCDVFTNPCNQPIALPATLCSGTGSSDTCGANMWCH 1197
>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical
protein F09C3.1 protein.
Length = 1391
Score = 28.7 bits (61), Expect = 5.0
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 398 YERHNAEIAAFHLDRILGFRRAMPVVGRVLNMTTEIYDVTEGDILKTFF 544
Y +++A H D I+ +RRAM V E DV EG +KT F
Sbjct: 105 YRQNDATPVYRHSDNIMQWRRAMESVRLPEIFIPETADVFEGRNMKTVF 153
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 608 AICGNPDMLEGSFAAFLPSSDVAERK 685
A+ GNPD +G+ +P VAERK
Sbjct: 716 ALTGNPDKPQGAIVEHVPEGFVAERK 741
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +2
Query: 608 AICGNPDMLEGSFAAFLPSSDVAERK 685
A+ GNPD +G+ +P VAERK
Sbjct: 716 ALTGNPDKPQGAIVEHVPEGFVAERK 741
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 275 KEGGTQLKLIIDYPNGVQALFKPMRFARD 361
K T K+ +DYPN +LF P R+ ++
Sbjct: 46 KTWSTNNKITVDYPNRFTSLFTPKRYYKE 74
>AF036706-7|AAK39282.1| 562|Caenorhabditis elegans Hypothetical
protein T07A9.10 protein.
Length = 562
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +2
Query: 89 NVLRPEN--PTIGEMEDLELSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVL 262
N+LRP+N +G + L ++ S + ++ +E++E+G LVE + ++ +P +
Sbjct: 13 NILRPQNYDSKLGHRKFSVLVLDKSAMVVVNSCLSLNEVFEEGVTLVEDLTRNREPMPSM 72
Query: 263 HA 268
A
Sbjct: 73 DA 74
>Z92973-1|CAB07493.2| 323|Caenorhabditis elegans Hypothetical
protein Y6G8.1 protein.
Length = 323
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +2
Query: 443 ILGFRRAMPVVGRVLNMTTEIYDVTEGDILKTFFVSPANNFCFHGKCSYY 592
++GF + V +L I V KT F S N+FCF K SY+
Sbjct: 24 LIGFVVLIVVYTTLLPFYLRINQVNRERDNKTLFFSITNHFCFLVKTSYF 73
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 23 LFAQLQGSAFDNAVVIP-PHRDLNVLRPENPTIGEMED 133
LF +QG FD+A IP PH++ + P++ M+D
Sbjct: 142 LFDNVQGIIFDSAPSIPFPHQNGKAMMLSTPSVTYMKD 179
>U40933-2|AAL27242.1| 158|Caenorhabditis elegans Hypothetical
protein F20D12.7 protein.
Length = 158
Score = 27.9 bits (59), Expect = 8.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +2
Query: 677 ERKVWRHPWRRSYHKRRKAQW 739
+ + WR W H RRKA W
Sbjct: 13 QEQTWREKWTIFRHNRRKASW 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,943,824
Number of Sequences: 27780
Number of extensions: 368243
Number of successful extensions: 1032
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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