Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2069
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.       35   0.15 
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt...    35   0.15 
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro...    35   0.15 
AC013451-1|AAF87081.1|  969|Homo sapiens LTBP-2 protein.               35   0.15 
AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming gro...    35   0.15 
BC105098-1|AAI05099.1|  463|Homo sapiens PNMA3 protein protein.        30   5.5  
BC105096-1|AAI05097.1|  463|Homo sapiens PNMA3 protein protein.        30   5.5  
AF083116-1|AAF05627.1|  463|Homo sapiens paraneoplastic neuronal...    30   5.5  

>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
          Length = 1821

 Score = 35.1 bits (77), Expect = 0.15
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 276 LPVGPQDRVCSYRRPRQVFFCVAPLSQNGSLMPIENTY**SLTPVVVKIHVSHEPRCS 103
           LP+   DR    R  R      APL Q+   +P+ N    S+ P +VK+H+ H P  S
Sbjct: 429 LPIPQPDREPPGRGSRPRALLEAPLKQSTFTLPLSNQLA-SVNPSLVKVHIHHPPEAS 485


>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
           factor-beta-binding protein-2 protein.
          Length = 1821

 Score = 35.1 bits (77), Expect = 0.15
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 276 LPVGPQDRVCSYRRPRQVFFCVAPLSQNGSLMPIENTY**SLTPVVVKIHVSHEPRCS 103
           LP+   DR    R  R      APL Q+   +P+ N    S+ P +VK+H+ H P  S
Sbjct: 429 LPIPQPDREPPGRGSRPRALLEAPLKQSTFTLPLSNQLA-SVNPSLVKVHIHHPPEAS 485


>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
           factor beta binding protein 2 protein.
          Length = 1821

 Score = 35.1 bits (77), Expect = 0.15
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 276 LPVGPQDRVCSYRRPRQVFFCVAPLSQNGSLMPIENTY**SLTPVVVKIHVSHEPRCS 103
           LP+   DR    R  R      APL Q+   +P+ N    S+ P +VK+H+ H P  S
Sbjct: 429 LPIPQPDREPPGRGSRPRALLEAPLKQSTFTLPLSNQLA-SVNPSLVKVHIHHPPEAS 485


>AC013451-1|AAF87081.1|  969|Homo sapiens LTBP-2 protein.
          Length = 969

 Score = 35.1 bits (77), Expect = 0.15
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 276 LPVGPQDRVCSYRRPRQVFFCVAPLSQNGSLMPIENTY**SLTPVVVKIHVSHEPRCS 103
           LP+   DR    R  R      APL Q+   +P+ N    S+ P +VK+H+ H P  S
Sbjct: 429 LPIPQPDREPPGRGSRPRALLEAPLKQSTFTLPLSNQLA-SVNPSLVKVHIHHPPEAS 485


>AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming growth
           factor beta binding protein 2 variant protein.
          Length = 1700

 Score = 35.1 bits (77), Expect = 0.15
 Identities = 20/58 (34%), Positives = 28/58 (48%)
 Frame = -1

Query: 276 LPVGPQDRVCSYRRPRQVFFCVAPLSQNGSLMPIENTY**SLTPVVVKIHVSHEPRCS 103
           LP+   DR    R  R      APL Q+   +P+ N    S+ P +VK+H+ H P  S
Sbjct: 308 LPIPQPDREPPGRGSRPRALLEAPLKQSTFTLPLSNQLA-SVNPSLVKVHIHHPPEAS 364


>BC105098-1|AAI05099.1|  463|Homo sapiens PNMA3 protein protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 367 NGERCLRYLKVPTDCGSGRFEMKCLGRCR 281
           N  RC+  L +P DCG   FE      CR
Sbjct: 16  NTRRCMLILGIPEDCGEDEFEETLQEACR 44


>BC105096-1|AAI05097.1|  463|Homo sapiens PNMA3 protein protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 367 NGERCLRYLKVPTDCGSGRFEMKCLGRCR 281
           N  RC+  L +P DCG   FE      CR
Sbjct: 16  NTRRCMLILGIPEDCGEDEFEETLQEACR 44


>AF083116-1|AAF05627.1|  463|Homo sapiens paraneoplastic neuronal
           antigen MA3 protein.
          Length = 463

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -3

Query: 367 NGERCLRYLKVPTDCGSGRFEMKCLGRCR 281
           N  RC+  L +P DCG   FE      CR
Sbjct: 16  NTRRCMLILGIPEDCGEDEFEETLQEACR 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,489,275
Number of Sequences: 237096
Number of extensions: 1781449
Number of successful extensions: 3586
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3581
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)