Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2069
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X17551-2|CAA35587.1|  888|Drosophila melanogaster protein ( D.me...    35   0.075
AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p pro...    35   0.075
BT023791-1|AAZ41800.1|  948|Drosophila melanogaster GH14566p pro...    30   1.6  
AY102670-1|AAM27499.1|  688|Drosophila melanogaster GM14040p pro...    30   1.6  
AJ556816-1|CAD89221.1|  949|Drosophila melanogaster SMG6 protein...    30   1.6  
AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown prot...    30   1.6  
AE014297-3688|AAF56380.2|  948|Drosophila melanogaster CG6369-PA...    30   1.6  
AL121804-2|CAB58065.1|  468|Drosophila melanogaster EG:BACR7C10....    29   3.7  
AE014298-420|AAF45795.2|  468|Drosophila melanogaster CG13761-PB...    29   3.7  

>X17551-2|CAA35587.1|  888|Drosophila melanogaster protein (
           D.melanogaster white-one mutant DNA with Doc retroposon,
           inserted inwhite locuspromoter region.  ).
          Length = 888

 Score = 34.7 bits (76), Expect = 0.075
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 73  SESRFCRITVGAPWFVRNVDLHDDWS*TLSVSI 171
           ++SR  RI  GAPW++RN ++H D    L + +
Sbjct: 815 AQSRILRIITGAPWYLRNENIHRDLKIKLVIEV 847


>AY047531-1|AAK77263.1|  888|Drosophila melanogaster GH03753p
           protein.
          Length = 888

 Score = 34.7 bits (76), Expect = 0.075
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +1

Query: 73  SESRFCRITVGAPWFVRNVDLHDDWS*TLSVSI 171
           ++SR  RI  GAPW++RN ++H D    L + +
Sbjct: 815 AQSRILRIITGAPWYLRNENIHRDLKIKLVIEV 847


>BT023791-1|AAZ41800.1|  948|Drosophila melanogaster GH14566p
           protein.
          Length = 948

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 TVVREKRGSSRRLELDSISKYFQSASVSHF-EKAARHKKTL 227
           TVV+E  G S+ ++LDS     Q+  + HF E ++R KK+L
Sbjct: 805 TVVKELDGLSKGVKLDSYRSSKQTQRIHHFDEVSSRAKKSL 845


>AY102670-1|AAM27499.1|  688|Drosophila melanogaster GM14040p
           protein.
          Length = 688

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 TVVREKRGSSRRLELDSISKYFQSASVSHF-EKAARHKKTL 227
           TVV+E  G S+ ++LDS     Q+  + HF E ++R KK+L
Sbjct: 545 TVVKELDGLSKGVKLDSYRSSKQTQRIHHFDEVSSRAKKSL 585


>AJ556816-1|CAD89221.1|  949|Drosophila melanogaster SMG6 protein
           protein.
          Length = 949

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 TVVREKRGSSRRLELDSISKYFQSASVSHF-EKAARHKKTL 227
           TVV+E  G S+ ++LDS     Q+  + HF E ++R KK+L
Sbjct: 805 TVVKELDGLSKGVKLDSYRSSKQTQRIHHFDEVSSRAKKSL 845


>AF237761-2|AAF81411.1|  908|Drosophila melanogaster unknown
           protein.
          Length = 908

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 76  ESRFCRITVGAPWFVRNVDLHDDWS*TLSVSIFNRH 183
           +++  R+  G  WFVRN  LH D          N+H
Sbjct: 825 QNKVARLITGCEWFVRNTTLHRDLKLATVFDEINKH 860


>AE014297-3688|AAF56380.2|  948|Drosophila melanogaster CG6369-PA
           protein.
          Length = 948

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +3

Query: 108 TVVREKRGSSRRLELDSISKYFQSASVSHF-EKAARHKKTL 227
           TVV+E  G S+ ++LDS     Q+  + HF E ++R KK+L
Sbjct: 805 TVVKELDGLSKGVKLDSYRSSKQTQRIHHFDEVSSRAKKSL 845


>AL121804-2|CAB58065.1|  468|Drosophila melanogaster EG:BACR7C10.4
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 394 VLKSQYSYENGERCLRYLKVPTDCGSGRFEMKCLGRCRL 278
           VLKSQY  E  + CL   KV   C + R+   C   C++
Sbjct: 50  VLKSQYRLERCDNCLEATKV-LKCSNCRYVSYCHRSCQM 87


>AE014298-420|AAF45795.2|  468|Drosophila melanogaster CG13761-PB
           protein.
          Length = 468

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 394 VLKSQYSYENGERCLRYLKVPTDCGSGRFEMKCLGRCRL 278
           VLKSQY  E  + CL   KV   C + R+   C   C++
Sbjct: 50  VLKSQYRLERCDNCLEATKV-LKCSNCRYVSYCHRSCQM 87


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,375,114
Number of Sequences: 53049
Number of extensions: 556579
Number of successful extensions: 1257
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)