Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2069
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61956-3|ABA03115.1| 402|Caenorhabditis elegans Hypothetical pr... 29 2.6
U61956-2|ABA03113.1| 440|Caenorhabditis elegans Hypothetical pr... 29 2.6
U61956-1|ABA03114.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.6
U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 27 6.0
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 27 6.0
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 27 6.0
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 27 6.0
AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical... 27 6.0
AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotei... 27 6.0
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 27 8.0
U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily ass... 27 8.0
U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily ass... 27 8.0
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 27 8.0
>U61956-3|ABA03115.1| 402|Caenorhabditis elegans Hypothetical
protein R13H7.2c protein.
Length = 402
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 356 VFEVPKGTHGLWIGKIRNEVFRAMSSVYQSVRRIGYVVTGGHDKC 222
V+ +P L GK+ N V MSSVY RR+ ++ G D C
Sbjct: 317 VYAIPISGSWLITGKVANFVLFCMSSVYFR-RRLRDLIRGRFDMC 360
>U61956-2|ABA03113.1| 440|Caenorhabditis elegans Hypothetical
protein R13H7.2a protein.
Length = 440
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 356 VFEVPKGTHGLWIGKIRNEVFRAMSSVYQSVRRIGYVVTGGHDKC 222
V+ +P L GK+ N V MSSVY RR+ ++ G D C
Sbjct: 355 VYAIPISGSWLITGKVANFVLFCMSSVYFR-RRLRDLIRGRFDMC 398
>U61956-1|ABA03114.1| 408|Caenorhabditis elegans Hypothetical
protein R13H7.2b protein.
Length = 408
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 356 VFEVPKGTHGLWIGKIRNEVFRAMSSVYQSVRRIGYVVTGGHDKC 222
V+ +P L GK+ N V MSSVY RR+ ++ G D C
Sbjct: 323 VYAIPISGSWLITGKVANFVLFCMSSVYFR-RRLRDLIRGRFDMC 366
>U13071-2|AAL65793.1| 988|Caenorhabditis elegans Hypothetical
protein T22F7.3 protein.
Length = 988
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 264 PQDRVCSYRRPRQVFFCVAPLSQNGSLMPIENT-Y**SLTPVVVKIHVSHEPRCSDGY 94
P D +C + R ++C AP ++N + P + T + V+ +++ CSDGY
Sbjct: 798 PSDFLCRFNAQRNRYYCCAPTTEN--VCPDGRALFRAKKTLLPVRCTLNNANTCSDGY 853
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 343 GTSNTVHRSRNYTETLELVSQGGWRVYVVDVYG 441
GT+ V R YT+ LEL+ + G V DV G
Sbjct: 215 GTAMHVAAGRGYTQLLELLIKAGGNVRAQDVEG 247
>AL132904-11|CAC35844.1| 380|Caenorhabditis elegans Hypothetical
protein Y111B2A.15 protein.
Length = 380
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 323 WIGKIRNEVFRAMSSVYQSVRRIGY 249
W+G I +V M SV +RR+GY
Sbjct: 300 WVGTIPEDVVADMDSVAPMLRRLGY 324
>AF049709-1|AAC36062.1| 380|Caenorhabditis elegans tyrosylprotein
sulfotransferase-A protein.
Length = 380
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 323 WIGKIRNEVFRAMSSVYQSVRRIGY 249
W+G I +V M SV +RR+GY
Sbjct: 300 WVGTIPEDVVADMDSVAPMLRRLGY 324
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 214 CRAAFSKWLTDAD*KY--LLIESNSSRREDP 128
C+A FSKW + D K+ LL + N +R+DP
Sbjct: 412 CQALFSKWDDEYD-KFIALLRDINKKKRDDP 441
>U29614-2|AAM54190.1| 1020|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform a protein.
Length = 1020
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 123 KRGSSRRLELDSISKYFQSASVSHFEKAARHKKTLVVAAGNY 248
K SR+ +D FQ SH+ +AA T+ GNY
Sbjct: 412 KLSKSRQDRVDKFILQFQKTQDSHYMRAAIQLNTIFPDQGNY 453
>U29614-1|AAM54191.1| 1061|Caenorhabditis elegans Temporarily
assigned gene nameprotein 279, isoform b protein.
Length = 1061
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 123 KRGSSRRLELDSISKYFQSASVSHFEKAARHKKTLVVAAGNY 248
K SR+ +D FQ SH+ +AA T+ GNY
Sbjct: 453 KLSKSRQDRVDKFILQFQKTQDSHYMRAAIQLNTIFPDQGNY 494
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -3
Query: 214 CRAAFSKWLTDAD*KY--LLIESNSSRREDP 128
C+A FSKW + D K+ LL + N +R+DP
Sbjct: 412 CQALFSKWDDEYD-KFIALLRDINKKKRDDP 441
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,845,095
Number of Sequences: 27780
Number of extensions: 278014
Number of successful extensions: 708
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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