Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2065
         (436 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   2.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   2.9  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   2.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.1  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    20   8.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   8.9  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    20   8.9  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    20   8.9  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    20   8.9  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like
          protein protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 2/18 (11%)
 Frame = -1

Query: 79 HRHHCWVLV--ARIRGKV 32
          H+ HC+VLV  AR R  V
Sbjct: 36 HKEHCYVLVRLARFRDSV 53


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = -3

Query: 413 SPSPLVVQAYPTPSPG 366
           +P+ ++ + YP+P PG
Sbjct: 314 TPTSVMTELYPSPVPG 329


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 10/44 (22%), Positives = 17/44 (38%)
 Frame = +2

Query: 95  RVPDDCEERSEPGASSLGVPCAPPNCARWRNHRLKIELKGDKRY 226
           ++ +    R +P           P    W  +  ++E KGD RY
Sbjct: 802 KLRNQTSRRGDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRY 845


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = -1

Query: 262 AALFTSAMLIFA 227
           AALFTS ML+ A
Sbjct: 198 AALFTSPMLVIA 209


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 99  TRRFHEPIDTIAGSSSPVY 43
           T  FH P   IA  +SP+Y
Sbjct: 203 TYDFHIPGGGIAAENSPLY 221


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 424 GAACXLHHWWSRPIQL 377
           G  C LHH  S+ I+L
Sbjct: 852 GKICTLHHHLSKLIRL 867


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 263 GGSFHKCNADICSTAC 216
           G  +H CN  I +T C
Sbjct: 155 GIQYHICNTVISATVC 170


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 263 GGSFHKCNADICSTAC 216
           G  +H CN  I +T C
Sbjct: 151 GIQYHICNTVISATVC 166


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 20.2 bits (40), Expect = 8.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 32  NFAAYTGDEDPAMVSMG 82
           NF A  GD+ P + +MG
Sbjct: 439 NFGAAHGDDVPYIFNMG 455


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,073
Number of Sequences: 336
Number of extensions: 2307
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9670396
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)