Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2065
(436 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 0.94
SPCC132.04c |||NAD-dependent glutamate dehydrogenase |Schizosacc... 26 2.9
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 27.5 bits (58), Expect = 0.94
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ S+ N + P+ + V + + T SS +TS TA N SI + + L
Sbjct: 1231 NSSTPITSSSILNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSVL 1290
Score = 27.1 bits (57), Expect = 1.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 463 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 522
Score = 27.1 bits (57), Expect = 1.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 2575 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2634
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 871 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 930
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 1027 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 1086
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 1807 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 1866
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 1999 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2058
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 2671 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2730
Score = 26.6 bits (56), Expect = 1.6
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 2899 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2958
Score = 26.2 bits (55), Expect = 2.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS TA N S + L
Sbjct: 2995 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSTVL 3054
Score = 25.8 bits (54), Expect = 2.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT-ANISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS T N S + AL
Sbjct: 1699 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTAL 1758
Score = 25.8 bits (54), Expect = 2.9
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ +V N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 1711 NSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 1770
Score = 25.8 bits (54), Expect = 2.9
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ +V N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 2263 NTSTPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 2322
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT-ANISIALVKRAAL 266
N++ P+T+ SV N + P+ + V + + T SS +TS T N S + + L
Sbjct: 1399 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVVNTSTPITSSSVL 1458
Score = 25.4 bits (53), Expect = 3.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ SV N + P+ + V + + + SS +TS TA N S + + L
Sbjct: 1543 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSSVL 1602
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + + + + T SS +TS TA N S + + L
Sbjct: 403 NTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPITSSTALNTSTPITSSSVL 462
Score = 25.0 bits (52), Expect = 5.0
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT-ANISIALVKRAAL 266
N++ P+T+ + N +PP+ + V + + T +S +TS T N S + AL
Sbjct: 1639 NSSTPITSSTALNTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTAL 1698
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ +V N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 1651 NTSPPITSSTVVNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVL 1710
Score = 25.0 bits (52), Expect = 5.0
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ SV N + P+ + V + + T SS +TS TA N S + + L
Sbjct: 2527 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSLTALNSSTPITSSSVL 2586
Score = 25.0 bits (52), Expect = 5.0
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS T N S + + L
Sbjct: 3259 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTTLNTSTPITSSSVL 3318
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ SV N + P+ + V + + T SS +TS + N S + AL
Sbjct: 811 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSSVLNSSTPITSSTAL 870
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ +V N + P+ + V + + T SS +TS T N S + + L
Sbjct: 1171 NSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVL 1230
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ +V N + P+ + V + + T SS +TS T N S + + L
Sbjct: 1483 NSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVL 1542
Score = 24.6 bits (51), Expect = 6.7
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT 227
N++ P+T+ SV N + P+ + V + + T SS +TS T
Sbjct: 2239 NSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 2284
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT-ANISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + + SS +TS T N S + AL
Sbjct: 2311 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTAL 2370
Score = 24.6 bits (51), Expect = 6.7
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ +V N + P+ + V + + T +S +TS TA N S ++ + L
Sbjct: 2323 NSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTALNTSTSITSSSVL 2382
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS T N S + + L
Sbjct: 2479 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2538
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT-ANISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + + SS +TS T N S + AL
Sbjct: 2719 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTAL 2778
Score = 24.6 bits (51), Expect = 6.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T SS +TS T N S + + L
Sbjct: 2779 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2838
Score = 24.2 bits (50), Expect = 8.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT 227
N + P+T+ SV N + P+ + V + + T SS +TS T
Sbjct: 1135 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1180
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ +V N + P+ + V + + T SS +TS T N S + + L
Sbjct: 1351 NSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 1410
Score = 24.2 bits (50), Expect = 8.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT 227
N + P+T+ SV N + P+ + V + + T SS +TS T
Sbjct: 1447 NTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSST 1492
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGTA-NISIALVKRAAL 266
N++ P+T+ +V N + P+ + V + + T SS +TS T N S + + L
Sbjct: 2191 NSSTPITSSTVVNTSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVL 2250
Score = 24.2 bits (50), Expect = 8.8
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +3
Query: 90 NAACPMTARSVPNPAPPVWAFLVPLLTVRAGAITGSRSSLRVTSGT-ANISIALVKRAAL 266
N + P+T+ SV N + P+ + V + + T +S +TS T N S + + L
Sbjct: 3391 NTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTVVNSSTPITSSSVL 3450
>SPCC132.04c |||NAD-dependent glutamate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1106
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 84 EPIDTIAGSSSPVYAAKLARVVTHAQ 7
EP+ IA +YAAK+A +HA+
Sbjct: 145 EPVSIIADHIEIIYAAKIAAHASHAK 170
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,818,541
Number of Sequences: 5004
Number of extensions: 33238
Number of successful extensions: 217
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 156095170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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