Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2064
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    25   3.1  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   9.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.4  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 212  SENNARPRSAALGHARERSATLGNARPRSGALGAR 108
            S + +R RS +   +R  SA    +R RSG+ G+R
Sbjct: 1093 SGSRSRSRSRSRSRSRSGSAKGSRSRSRSGSGGSR 1127


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 5/17 (29%), Positives = 11/17 (64%)
 Frame = -3

Query: 683 WVLIMNYVHCAIVHCAL 633
           WV  + ++ C ++ C+L
Sbjct: 284 WVFFVQFIQCTMIWCSL 300


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +1

Query: 454 LPAACLTFDTNIRQYLFKSGNNYKMFNTV 540
           + A C++    +R Y  +S N ++++ TV
Sbjct: 890 IQALCISQIHQLRSYFVESQNRHELYRTV 918


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 762,553
Number of Sequences: 2352
Number of extensions: 15782
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)