Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2064
         (709 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          26   0.30 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      26   0.30 
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   8.7  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    21   8.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   8.7  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 352 AQNKINSLHPYLFYLYTAVTTRQCSRHLTL 263
           A+N IN    Y++ LYTAV TR  ++ + L
Sbjct: 131 AKNNINEAQ-YIYSLYTAVITRPDTKFIQL 159


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 352 AQNKINSLHPYLFYLYTAVTTRQCSRHLTL 263
           A+N IN    Y++ LYTAV TR  ++ + L
Sbjct: 131 AKNNINEAQ-YIYSLYTAVITRPDTKFIQL 159


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 444 TYQPPSGLSN 473
           TY PPSG+ N
Sbjct: 332 TYMPPSGIPN 341


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
            receptor 1 protein.
          Length = 953

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +1

Query: 181  AAERGRALFSLHKWITRAMYCQIYFETLKLNDVNTVS*LLLCINRINMDEAS 336
            AA++ R      K +  ++  Q   ++  LND  TVS  +  + R N+   S
Sbjct: 864  AADKWRGAIEKRKTLRASIAAQRRIQSNGLNDPTTVSLAVDTVARSNVTPRS 915


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +3

Query: 444 TYQPPSGLSN 473
           TY PPSG+ N
Sbjct: 332 TYMPPSGIPN 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,102
Number of Sequences: 438
Number of extensions: 4204
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)