Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2059
         (723 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    26   1.0  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   7.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.6  

>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 162 YILYSCILVVGTLVSP 209
           YI+Y C+L+ GT++ P
Sbjct: 568 YIIYQCMLMFGTILGP 583


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 607 RVTR*SRHYSRRENNRLQDYENHLTF 684
           R  R  RH++R    R+ +Y N L+F
Sbjct: 124 RYARSFRHFTREALPRMDNYRNILSF 149


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 430 NFFFIYHRWVDELTAHLV 377
           N  F Y +W++E   HL+
Sbjct: 33  NVKFYYQKWMEEQAQHLI 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 794,342
Number of Sequences: 2352
Number of extensions: 16956
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)