Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2053
         (777 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1162 - 11002193-11002274,11002628-11002662,11004285-110044...    31   1.0  
04_04_1120 + 31037811-31038813,31038903-31038991,31039094-310391...    30   1.8  
08_02_0499 - 17820615-17822516,17823224-17823373,17823491-178235...    28   7.2  
01_01_0155 - 1362710-1363267                                           28   9.5  

>07_01_1162 -
           11002193-11002274,11002628-11002662,11004285-11004419,
           11004521-11005048
          Length = 259

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/65 (24%), Positives = 34/65 (52%)
 Frame = +3

Query: 141 SLIVDGKGLTFFTEFNKCIVSIKSSFENQANNTDNIHNVKNIFSIFLRDEFIKQVPQFRT 320
           +L+ DG  L    +F KC+  +++ +    +  D +  +KN  S+F +D F  ++  + T
Sbjct: 194 ALVSDGPNLDAVVDFLKCVPCLETLYIT--SRPDKV--IKNARSVFAKDIFYLKIRYYAT 249

Query: 321 IMQYL 335
           +  Y+
Sbjct: 250 MSDYV 254


>04_04_1120 +
           31037811-31038813,31038903-31038991,31039094-31039163,
           31039270-31039353,31039452-31039528,31039631-31039712,
           31039847-31039929,31040270-31040333,31040435-31040566,
           31040674-31040777,31040901-31040996,31041144-31041251
          Length = 663

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 773 GETVAWRVQNTQHALVILLAQSDGCFFAFFDKWHAHVA 660
           GE  A  +++     V+LL    GC+FA    WHA +A
Sbjct: 80  GEAAAKALRSRSRRPVVLLVDRGGCYFA-LKTWHAQLA 116


>08_02_0499 -
           17820615-17822516,17823224-17823373,17823491-17823568,
           17823948-17824061,17824145-17824297,17826928-17827071,
           17827162-17827516,17828574-17828741,17829522-17829751,
           17829916-17830049,17830686-17830749
          Length = 1163

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
 Frame = +3

Query: 249 HNVKNIFSIFLRDEFIKQVP---QFRTIMQYLQTYYNPTPAPDVDEIM 383
           HN+     +F+  E IKQ P     +  MQ++ T+  PT  P +D ++
Sbjct: 457 HNISEAKEVFV--EGIKQAPCKALIKGFMQFMSTHGGPTEIPILDSVI 502


>01_01_0155 - 1362710-1363267
          Length = 185

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 459 CSARTPSICICTRNIEFCLRAC 394
           CS   P IC C   +E C  AC
Sbjct: 126 CSRSLPPICRCADEVESCAAAC 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,409,169
Number of Sequences: 37544
Number of extensions: 411264
Number of successful extensions: 1236
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)