Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2053
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical pr... 31 0.70
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 29 2.8
AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical... 29 2.8
Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical pr... 29 3.7
U97008-11|AAK72054.1| 224|Caenorhabditis elegans Hypothetical p... 29 3.7
AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical ... 29 3.7
AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein. 29 3.7
Z82052-4|CAB04827.2| 374|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81542-2|CAB04416.1| 228|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 28 8.6
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z81542-3|CAB04415.1| 308|Caenorhabditis elegans Hypothetical
protein F49A5.4 protein.
Length = 308
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 470 LVEGAQRGRQVSAFALETLNFVCELARLTHD 378
+ G Q G+ SA ET++FVCEL +D
Sbjct: 157 MTNGTQAGKWASASCTETMSFVCELPATIYD 187
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +3
Query: 297 KQVPQFRTIMQY-LQTYYNPTPAPDVDEIMCQSCKLAN 407
K + FR ++++ L T PTP PDV + M + KL N
Sbjct: 671 KNLDWFRKLLEHTLPTDGKPTPEPDVSQSMYKRLKLIN 708
>AC024696-11|AAK84510.1| 401|Caenorhabditis elegans Hypothetical
protein F07B7.14 protein.
Length = 401
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +1
Query: 337 KHITIRRRHPTWTRSC---VSRASSQTKFNVSSANADTW 444
+ I+ +R TW SC R+SSQ K N+ N TW
Sbjct: 10 RRISRKRMSRTWLASCRRPEPRSSSQPKENLPKENVSTW 48
>Z82052-3|CAB04826.1| 363|Caenorhabditis elegans Hypothetical
protein T25E12.8 protein.
Length = 363
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 470 LVEGAQRGRQVSAFALETLNFVCELARLTHD 378
++ G Q G+ S T++FVCEL HD
Sbjct: 209 IITGTQAGQWKSGLCNMTMSFVCELPPTVHD 239
>Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical
protein T20B3.12 protein.
Length = 367
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 470 LVEGAQRGRQVSAFALETLNFVCELARLTHD 378
+ G Q G+ S ET++FVCEL +D
Sbjct: 215 MTTGTQAGQWASGLCNETMSFVCELPTTIYD 245
>U97008-11|AAK72054.1| 224|Caenorhabditis elegans Hypothetical
protein C03G6.5 protein.
Length = 224
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 196 IHLLNSVKKVRPLPSTIKLWLKYFENKKHN-ESISSRNNCASKHTFSKRSYVLNLKLYCN 20
+ L + +KV L K LK F+ + S S NC +K K YV ++K YC+
Sbjct: 75 VRLSDFAEKVDNLDMNDKTKLKEFKRSCDSLHSCYSNLNCTTKSDDEKDKYVESIKQYCD 134
>AL024499-5|CAC42318.1| 562|Caenorhabditis elegans Hypothetical
protein H38K22.5c protein.
Length = 562
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -1
Query: 525 SEACQTWVLKKCPNHFASPRRGCSARTPSICICT 424
S C W L+ CP + G R P I C+
Sbjct: 484 SSVCLAWTLRSCPTQTTAQPSGQVTRVPKITDCS 517
>AF031840-1|AAC13676.1| 562|Caenorhabditis elegans GLY6c protein.
Length = 562
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = -1
Query: 525 SEACQTWVLKKCPNHFASPRRGCSARTPSICICT 424
S C W L+ CP + G R P I C+
Sbjct: 484 SSVCLAWTLRSCPTQTTAQPSGQVTRVPKITDCS 517
>Z82052-4|CAB04827.2| 374|Caenorhabditis elegans Hypothetical
protein T25E12.9 protein.
Length = 374
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -2
Query: 470 LVEGAQRGRQVSAFALETLNFVCELARLTHD 378
+ G Q G+ S ET++FVCEL +D
Sbjct: 219 MTTGTQAGQWASGSCNETMSFVCELPATIYD 249
>Z78536-2|CAB01716.1| 363|Caenorhabditis elegans Hypothetical
protein C07A4.3 protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 452 AEHPRRGLAKWLGHFF-KTHVWHASDAVRVASN 547
AE+ + L KW+ HF K H+S AV V SN
Sbjct: 193 AEYSIKDLKKWIVHFHNKYRAHHSSPAVTVDSN 225
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/80 (22%), Positives = 34/80 (42%)
Frame = +3
Query: 12 AYRLQYSLRFNTYDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFNK 191
AY+ + S+ +D FEN+ + D++ S+ + K + +++ T E
Sbjct: 161 AYKRKKSVITEVFDEFENILWSVCSFSDKLTSIS-CYKKEMDPDCLIENVN-TLSNELEN 218
Query: 192 CIVSIKSSFENQANNTDNIH 251
+ + F NTD IH
Sbjct: 219 -FEKVTAEFTKYLVNTDGIH 237
>Z81542-2|CAB04416.1| 228|Caenorhabditis elegans Hypothetical
protein F49A5.3 protein.
Length = 228
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -2
Query: 470 LVEGAQRGRQVSAFALETLNFVCELARLTHD 378
+ G Q G + ET++FVCEL +D
Sbjct: 77 MTTGTQAGNWANGSCTETMSFVCELPATVYD 107
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.6
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = -3
Query: 265 MFFTLCMLSVLLA*FSKLLFMETIHLLNSVKKVRPLPSTIK--LW--LKYFENKKHNESI 98
+F+ + +++++ KL E LN+ K + + + IK W L FEN + E I
Sbjct: 8 IFYFIFVIAIIPIVTEKLSLKENKERLNTCGKDKDIYNGIKNNRWHILAAFENGNNIEYI 67
Query: 97 SSRNNCASKHTFSKRSYVLNLKL 29
SS + +++H + +LN ++
Sbjct: 68 SSASLISNRHFITSAFSILNSQM 90
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +1
Query: 373 TRSCVSRASSQTKFNVSSANADTWRPR*APSTRACK--MVGTF 495
T + ++ A+S T N SSA + T P+ A T CK +VG F
Sbjct: 59 TTTTINPATSATTGNTSSATSTTKSPKIATKTPFCKKRIVGFF 101
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical protein
F46H5.4 protein.
Length = 2018
Score = 27.9 bits (59), Expect = 8.6
Identities = 31/158 (19%), Positives = 67/158 (42%), Gaps = 1/158 (0%)
Frame = +3
Query: 48 YDRFENVCFEAQLLRDEIDSLCFLFSKYFNQSLIVDGKGLTFFTEFN-KCIVSIKSSFEN 224
+++ N+C EA + +L F + +Q+L + KG F+E I K++F N
Sbjct: 1571 HEKQRNLC-EAAHSYLQASALVFEYIAQKDQNLSFESKGAATFSEITPNAIKESKTNF-N 1628
Query: 225 QANNTDNIHNVKNIFSIFLRDEFIKQVPQFRTIMQYLQTYYNPTPAPDVDEIMCQSCKLA 404
N D+ +++++ F IK + + +++ Q Y P + + K
Sbjct: 1629 SLKNADSENHIQSYH--FTEAGVIKILEKAFALLEKAQLYELLFPFSKIILKYYHATKSY 1686
Query: 405 NKIQCFECKCRYLASSLSTLDEGLQNGWDIFLRPMFGM 518
+++ + A + E +N D ++ P+ G+
Sbjct: 1687 SRVSHTHKRLGIAADQIKETGEYYENQSDAWISPLPGI 1724
>AF067942-6|AAG45579.1| 345|Caenorhabditis elegans Hypothetical
protein ZK6.4 protein.
Length = 345
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +1
Query: 40 LTRTTASKTCVLKRNCYEMKSI--RCVF 117
+TRTT K C L NC+ I +CVF
Sbjct: 36 ITRTTPVKKCYLGENCFTKTPITQKCVF 63
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,554,604
Number of Sequences: 27780
Number of extensions: 404968
Number of successful extensions: 1386
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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