Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2051
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X68130-1|CAA48237.1| 943|Drosophila melanogaster protein ( D.me... 54 2e-07
U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag p... 54 2e-07
AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein ... 54 2e-07
AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein ... 54 2e-07
AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown prot... 51 2e-06
X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element prot... 50 3e-06
S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein. 50 3e-06
AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein ... 47 3e-05
U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative singl... 46 5e-05
AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein ... 46 5e-05
AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein ... 46 5e-05
AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein ... 46 5e-05
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 44 1e-04
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 44 1e-04
M38643-1|AAA28939.1| 549|Drosophila melanogaster protein ( D.me... 35 0.091
M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic acid-b... 35 0.091
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 32 0.85
AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p pro... 31 2.0
AY071040-1|AAL48662.1| 507|Drosophila melanogaster RE12806p pro... 31 2.0
AF020349-1|AAC15518.1| 756|Drosophila melanogaster CROL GAMMA p... 31 2.0
AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA pr... 31 2.0
AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA p... 31 2.0
AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-P... 31 2.0
AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-P... 31 2.0
AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-P... 31 2.0
AE014134-2095|AAN10784.1| 756|Drosophila melanogaster CG14938-P... 31 2.0
AE014134-1979|AAF53024.1| 507|Drosophila melanogaster CG17086-P... 31 2.0
AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD... 30 3.4
U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein. 29 6.0
BT012442-1|AAS93713.1| 357|Drosophila melanogaster RH08715p pro... 29 6.0
AY071573-1|AAL49195.1| 479|Drosophila melanogaster RE63406p pro... 29 6.0
AL132792-1|CAB65848.1| 2224|Drosophila melanogaster EG:BACR19J1.... 29 6.0
AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD, ... 29 6.0
AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB, ... 29 6.0
AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA, ... 29 6.0
AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC, ... 29 6.0
AE013599-789|AAM68804.1| 357|Drosophila melanogaster CG8069-PB,... 29 6.0
AE013599-788|AAF58985.3| 453|Drosophila melanogaster CG8069-PA,... 29 6.0
AE013599-467|AAF59222.3| 2262|Drosophila melanogaster CG30494-PA... 29 6.0
>X68130-1|CAA48237.1| 943|Drosophila melanogaster protein (
D.melanogaster DNA sequenceof Het-A transposable element
9D4. ).
Length = 943
Score = 54.0 bits (124), Expect = 2e-07
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFR 514
HA +C RC++CAGEH+ + C +PR P +C NC H + + C ++
Sbjct: 656 HAKNSCMRPPRCMKCAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCPTYK 707
>U06920-1|AAC17188.3| 921|Drosophila melanogaster probable gag
protein protein.
Length = 921
Score = 54.0 bits (124), Expect = 2e-07
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFR 514
HA +C RC++CAGEH+ + C +PR P +C NC H + + C ++
Sbjct: 634 HAKNSCMRPPRCMKCAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCPAYK 685
>AJ635224-1|CAG25619.1| 951|Drosophila melanogaster gag protein
protein.
Length = 951
Score = 54.0 bits (124), Expect = 2e-07
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFR 514
HA +C RC++CAG+H+ + C +PR P +C NC +H + + C ++
Sbjct: 664 HAKNSCMKPPRCMKCAGDHLSSCCTKPRSTPATCVNCSGEHISAYKGCPTYK 715
>AJ542581-1|CAD65868.3| 965|Drosophila melanogaster gag protein
protein.
Length = 965
Score = 54.0 bits (124), Expect = 2e-07
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGV 490
H+ +C RC++CAG H+ + C +PR P +C NC +H + + C ++ R + V
Sbjct: 671 HSKNSCMRPPRCMKCAGGHLSSCCTKPRTTPATCVNCSGEHISAYKGCPAYKTEKRKLAV 730
>AF237761-1|AAF81410.1| 501|Drosophila melanogaster unknown
protein.
Length = 501
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCA---VFRKRAR 502
H + C A CV+CAGEH DC RPR +C NCG H A + C+ F +R+R
Sbjct: 295 HTAKYCRKAHICVKCAGEHPAKDCTRPRIELCTCYNCGGQHPANYKGCSKLQAFLQRSR 353
>X68816-2|CAA48714.1| 536|Drosophila melanogaster T-element
protein.
Length = 536
Score = 50.0 bits (114), Expect = 3e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFR 514
HA +C RC++ AGEH+ + C +PR P +C NC H + + C ++
Sbjct: 249 HAKNSCMRPPRCMKSAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCPAYK 300
>S56442-2|AAA14198.2| 536|Drosophila melanogaster Orf2 protein.
Length = 536
Score = 50.0 bits (114), Expect = 3e-06
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFR 514
HA +C RC++ AGEH+ + C +PR P +C NC H + + C ++
Sbjct: 249 HAKNSCMRPPRCMKSAGEHLSSCCTKPRTTPATCVNCSGQHISAYKGCPAYK 300
>AY600955-1|AAT12844.1| 1047|Drosophila melanogaster gag protein
protein.
Length = 1047
Score = 46.8 bits (106), Expect = 3e-05
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGV 490
H C +C++C H C +P++ P +CANC H + + C VF++ + + +
Sbjct: 803 HTKNYCRNPFKCMKCGQLHASVSCTKPKNLPATCANCNGSHVSSYKGCPVFQEAKQRLSI 862
>U14101-1|AAC46493.1| 1043|Drosophila melanogaster putative
single-stranded nucleicacid binding protein protein.
Length = 1043
Score = 46.0 bits (104), Expect = 5e-05
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGV 490
H C +C++C H C +P++ P +CANC H + + C F++ + + +
Sbjct: 803 HTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCPAFQEAKQRLSI 862
>AY561850-1|AAS68533.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 46.0 bits (104), Expect = 5e-05
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGV 490
H C +C++C H C +P++ P +CANC H + + C F++ + + +
Sbjct: 726 HTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCPAFQEAKQRLSI 785
>AY035777-1|AAK77970.1| 257|Drosophila melanogaster gag protein
protein.
Length = 257
Score = 46.0 bits (104), Expect = 5e-05
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGV 490
H C +C++C H C +P++ P +CANC H + + C F++ + + +
Sbjct: 13 HTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCPAFQEAKQRLSI 72
>AJ566116-1|CAD92792.1| 970|Drosophila melanogaster gag protein
protein.
Length = 970
Score = 46.0 bits (104), Expect = 5e-05
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGV 490
H C +C++C H C +P++ P +CANC H + + C F++ + + +
Sbjct: 726 HTKNYCRNPFKCMKCGQLHATVSCTKPKNLPATCANCNGSHVSSYKGCPAFQEAKQRLSI 785
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 672 EHASYNCHCAVR--CVRCAGEHIVADCPRPRDGPF--SCANCGKDHAAVDRRCAVFRK 511
E+ +C ++ CV C+ H A+CP+ +D C+NCG+ H A R C V+++
Sbjct: 389 EYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTANYRGCVVYKE 446
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 44.4 bits (100), Expect = 1e-04
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = -3
Query: 672 EHASYNCHCAVR--CVRCAGEHIVADCPRPRDGPF--SCANCGKDHAAVDRRCAVFRK 511
E+ +C ++ CV C+ H A+CP+ +D C+NCG+ H A R C V+++
Sbjct: 233 EYGHTKAYCTLKSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTANYRGCVVYKE 290
>M38643-1|AAA28939.1| 549|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 549
Score = 35.1 bits (77), Expect = 0.091
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMM 496
H+ C C +C+G H+ D C NCG DH + D+ C V ++A+ +
Sbjct: 379 HSKNYCAQDPICGKCSGPHMTGFALCISDVCL-CINCGGDHVSTDKSCPVRAEKAKKL 435
>M22874-1|AAA28674.1| 583|Drosophila melanogaster nucleic
acid-binding protiein protein.
Length = 583
Score = 35.1 bits (77), Expect = 0.091
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMM 496
H+ C C +C+G H+ D C NCG DH + D+ C V ++A+ +
Sbjct: 413 HSKNYCAQDPICGKCSGPHMTGFALCISDVCL-CINCGGDHVSTDKSCPVRAEKAKKL 469
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 31.9 bits (69), Expect = 0.85
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 2/55 (3%)
Frame = -3
Query: 669 HASYNCHCAVRCVRCAGEHIVADCPRPRDGPFS--CANCGKDHAAVDRRCAVFRK 511
H C A CV C H C ++ C NCG +H A R C ++++
Sbjct: 48 HTRSYCTLAPVCVVCGDLHDSKQCQINKENACEKKCNNCGGNHTANYRGCPIYKE 102
>AY119553-1|AAM50207.1| 878|Drosophila melanogaster GH27971p
protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 522 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 565
>AY071040-1|AAL48662.1| 507|Drosophila melanogaster RE12806p
protein.
Length = 507
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 645 AVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGVTVPPPA 472
+++C +CA V P D ++CANCG D + D + ++ + V P A
Sbjct: 291 SLKCGQCAEGFQVPRQPTEPDTSWNCANCGSDTSNADALAMLQSLQSEVNAVQALPMA 348
>AF020349-1|AAC15518.1| 756|Drosophila melanogaster CROL GAMMA
protein.
Length = 756
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 400 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 443
>AF020348-1|AAC15517.1| 891|Drosophila melanogaster CROL BETA
protein.
Length = 891
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 606 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
>AF020347-1|AAC15516.1| 962|Drosophila melanogaster CROL ALPHA
protein.
Length = 962
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 606 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
>AE014134-2098|AAF53121.2| 962|Drosophila melanogaster CG14938-PA,
isoform A protein.
Length = 962
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 606 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
>AE014134-2097|AAN10786.1| 891|Drosophila melanogaster CG14938-PB,
isoform B protein.
Length = 891
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 606 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 649
>AE014134-2096|AAN10785.1| 878|Drosophila melanogaster CG14938-PD,
isoform D protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 522 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 565
>AE014134-2095|AAN10784.1| 756|Drosophila melanogaster CG14938-PC,
isoform C protein.
Length = 756
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 672 EHASYNCHCAVRCVR--CAGEHIVADCPRPRDG--PFSCANCGK 553
+H+S N HC C + EH++ R G PF+C CGK
Sbjct: 400 QHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGK 443
>AE014134-1979|AAF53024.1| 507|Drosophila melanogaster CG17086-PA
protein.
Length = 507
Score = 30.7 bits (66), Expect = 2.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = -3
Query: 645 AVRCVRCAGEHIVADCPRPRDGPFSCANCGKDHAAVDRRCAVFRKRARMMGVTVPPPA 472
+++C +CA V P D ++CANCG D + D + ++ + V P A
Sbjct: 291 SLKCGQCAEGFQVPRQPTEPDTSWNCANCGSDTSNADALAMLQSLQSEVNAVQALPMA 348
>AE014296-1672|AAF50256.3| 2351|Drosophila melanogaster CG3654-PD
protein.
Length = 2351
Score = 29.9 bits (64), Expect = 3.4
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = -3
Query: 315 STLMAQANPPRQSKKVQPTPAPRGRTSAGAPTISR-PTSGITTL 187
S+ + QA+P S V+P P P + GAP+ S+ P+ G + L
Sbjct: 940 SSYLPQASPHYHSGYVRPPPTPTHQFGGGAPSGSKTPSQGSSPL 983
>U88578-1|AAD09632.1| 2222|Drosophila melanogaster sdk protein.
Length = 2222
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 449 LPARGACGAGGGTVTPIILARLRKTAHRLSTAAWS 553
LPA A G GG V PI +R L TA W+
Sbjct: 1566 LPAAPAVGVGGLKVVPITTTSVRVQWSALETALWN 1600
>BT012442-1|AAS93713.1| 357|Drosophila melanogaster RH08715p
protein.
Length = 357
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 495 PSSWPACGRPHTVCRRRHGPSRSWHR-KTGRPSASGSPLRCAPRHTL 632
PSS P G +R SR+ HR + G SASGS C PRH L
Sbjct: 92 PSSRPITGNQ----QRGLVKSRTGHRSRRGTSSASGSSDFCEPRHIL 134
>AY071573-1|AAL49195.1| 479|Drosophila melanogaster RE63406p
protein.
Length = 479
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 495 PSSWPACGRPHTVCRRRHGPSRSWHR-KTGRPSASGSPLRCAPRHTL 632
PSS P G +R SR+ HR + G SASGS C PRH L
Sbjct: 214 PSSRPITGNQ----QRGLVKSRTGHRSRRGTSSASGSSDFCEPRHIL 256
>AL132792-1|CAB65848.1| 2224|Drosophila melanogaster
EG:BACR19J1.1,FBgn0021764;sdk protein.
Length = 2224
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 449 LPARGACGAGGGTVTPIILARLRKTAHRLSTAAWS 553
LPA A G GG V PI +R L TA W+
Sbjct: 1568 LPAAPAVGVGGLKVVPITTTSVRVQWSALETALWN 1602
>AE014298-97|AAN09029.4| 2224|Drosophila melanogaster CG5227-PD,
isoform D protein.
Length = 2224
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 449 LPARGACGAGGGTVTPIILARLRKTAHRLSTAAWS 553
LPA A G GG V PI +R L TA W+
Sbjct: 1568 LPAAPAVGVGGLKVVPITTTSVRVQWSALETALWN 1602
>AE014298-96|AAF45541.5| 2224|Drosophila melanogaster CG5227-PB,
isoform B protein.
Length = 2224
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 449 LPARGACGAGGGTVTPIILARLRKTAHRLSTAAWS 553
LPA A G GG V PI +R L TA W+
Sbjct: 1568 LPAAPAVGVGGLKVVPITTTSVRVQWSALETALWN 1602
>AE014298-95|AAN09027.4| 2224|Drosophila melanogaster CG5227-PA,
isoform A protein.
Length = 2224
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 449 LPARGACGAGGGTVTPIILARLRKTAHRLSTAAWS 553
LPA A G GG V PI +R L TA W+
Sbjct: 1568 LPAAPAVGVGGLKVVPITTTSVRVQWSALETALWN 1602
>AE014298-94|AAN09028.5| 2232|Drosophila melanogaster CG5227-PC,
isoform C protein.
Length = 2232
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 449 LPARGACGAGGGTVTPIILARLRKTAHRLSTAAWS 553
LPA A G GG V PI +R L TA W+
Sbjct: 1568 LPAAPAVGVGGLKVVPITTTSVRVQWSALETALWN 1602
>AE013599-789|AAM68804.1| 357|Drosophila melanogaster CG8069-PB,
isoform B protein.
Length = 357
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 495 PSSWPACGRPHTVCRRRHGPSRSWHR-KTGRPSASGSPLRCAPRHTL 632
PSS P G +R SR+ HR + G SASGS C PRH L
Sbjct: 92 PSSRPITGNQ----QRGLVKSRTGHRSRRGTSSASGSSDFCEPRHIL 134
>AE013599-788|AAF58985.3| 453|Drosophila melanogaster CG8069-PA,
isoform A protein.
Length = 453
Score = 29.1 bits (62), Expect = 6.0
Identities = 21/47 (44%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 495 PSSWPACGRPHTVCRRRHGPSRSWHR-KTGRPSASGSPLRCAPRHTL 632
PSS P G +R SR+ HR + G SASGS C PRH L
Sbjct: 188 PSSRPITGNQ----QRGLVKSRTGHRSRRGTSSASGSSDFCEPRHIL 230
>AE013599-467|AAF59222.3| 2262|Drosophila melanogaster CG30494-PA
protein.
Length = 2262
Score = 29.1 bits (62), Expect = 6.0
Identities = 16/49 (32%), Positives = 28/49 (57%)
Frame = +1
Query: 502 PGPLAEDRTPSVDGGMVLPAVGTGKRAVPRPRAVRYDVLPGTPYATDRT 648
P P+A + TP ++ A+ T K +VP +A+ +V+P T + T+ T
Sbjct: 1684 PSPMAVESTPDLEA----VALDT-KESVPAAQAIPVEVVPETEHLTEET 1727
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,519,051
Number of Sequences: 53049
Number of extensions: 759943
Number of successful extensions: 4258
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 3453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4239
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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