Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2050
         (809 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0648 - 24716249-24717841                                         29   5.8  
02_04_0546 - 23782400-23782599,23782744-23782830,23782923-237834...    28   7.6  

>02_04_0648 - 24716249-24717841
          Length = 530

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = -2

Query: 127 RDGVYGHDCSRDAL--GYSRLSVQVLAREL 44
           +DG YGHD  R +L  GYSR  +   AR+L
Sbjct: 142 KDGFYGHDFIRTSLLDGYSRYGMMGDARKL 171


>02_04_0546 -
           23782400-23782599,23782744-23782830,23782923-23783442,
           23783801-23784000,23784457-23784561,23784923-23785020,
           23785168-23785271
          Length = 437

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 286 DVLARVHGDARVRVQRVYSELHDTLLLVQHGRIDLHSHDHESH 158
           DV+A+V  D R+   RV   + D+  L     I  H H+HE++
Sbjct: 119 DVIAKVIYDVRIS-SRVTCSIPDSSFLSTLNMIKAHVHEHEAY 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,352,519
Number of Sequences: 37544
Number of extensions: 363330
Number of successful extensions: 767
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2209429392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)