Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2048
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.    26   1.5  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   4.5  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   7.9  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   7.9  

>AY645021-1|AAT92557.1|  163|Anopheles gambiae even-skipped protein.
          Length = 163

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -1

Query: 741 FPFSKRFL*IGIP-SPCTHLTSPGLITSPGKCLMSKSLP 628
           +P  +R     +P +P T  T+PG+ ++P   L++ S+P
Sbjct: 8   YPLPQRTTATSLPVAPGTGPTTPGVYSAPNSMLVTGSMP 46


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +3

Query: 258 LKCHINKLHHT*LGNFIHAVHPVSV 332
           L  H+N  +H  +   +H +HP  V
Sbjct: 377 LNTHMNATNHALIQTLVHLMHPTRV 401


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = +2

Query: 545 NGDNLIMKHEIT-LTEALCGFEFVAKHLDGRDLLIR 649
           + D++++  E +  TEA+   EF+A+HL   DL I+
Sbjct: 433 SSDSILLSPEASKATEAV---EFIAEHLRNEDLYIQ 465


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 131 EDLYAGKTTKLQLSKNVICAHCKGVG 208
           +D YA + T++ L  +  C  C G+G
Sbjct: 674 QDFYANEETRICLPCHQECRGCHGLG 699


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,349
Number of Sequences: 2352
Number of extensions: 16561
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)