Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2043
         (492 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical ...    29   1.8  
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical pr...    27   7.4  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    27   9.8  
U23522-1|AAC46819.3|  962|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical
           protein Y6B3B.10 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 203 SYWTRMYWSTAWAVAFGIHSGMNSH 129
           S+W   Y+ T W  AF  H  ++SH
Sbjct: 107 SFWKLTYYGTVWIFAFYFHMCVDSH 131


>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
            F52G2.2a protein.
          Length = 1319

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 3    NHQSVQIRLNTQAMQK--IYETSPSQSEYQHQMSLEPGIPLPP 125
            +H S    +N Q   +  +Y++S SQ  YQ + +  P  PLPP
Sbjct: 1196 SHHSAGGSMNHQNFYQPPVYQSSSSQQSYQPRYNGAPSGPLPP 1238


>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical protein
            F52G2.2b protein.
          Length = 1129

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 3    NHQSVQIRLNTQAMQK--IYETSPSQSEYQHQMSLEPGIPLPP 125
            +H S    +N Q   +  +Y++S SQ  YQ + +  P  PLPP
Sbjct: 1006 SHHSAGGSMNHQNFYQPPVYQSSSSQQSYQPRYNGAPSGPLPP 1048


>Z75525-2|CAA99763.1| 1390|Caenorhabditis elegans Hypothetical protein
            C03D6.4 protein.
          Length = 1390

 Score = 27.1 bits (57), Expect = 7.4
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +3

Query: 279  PQTRS---TSGDSPP*INALLPTLTSSGAGIERPHTKASPVDKLGSSSRSALLT 431
            P T+S   T  D PP +  ++ T+ S    I      +SP+ KL +++ +  +T
Sbjct: 863  PSTKSDAATQADEPPIVKTVVVTVESPAKPIASAPAVSSPLIKLNTTTATTTMT 916


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +3

Query: 27   LNTQAMQKIYETSPSQSEYQHQMSLEPGIPLPP 125
            +  Q  Q      P  S+ Q+Q  + PG  LPP
Sbjct: 3333 IGQQGQQSQQPQQPQVSQQQNQRGMNPGAQLPP 3365


>U23522-1|AAC46819.3|  962|Caenorhabditis elegans Hypothetical
           protein W06B4.3 protein.
          Length = 962

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +2

Query: 206 PLAKSGN-VSFTQATSGIGTLATERAPNTQYLW*FTTVN 319
           P+ K G   S     +G+  LATE+AP+T +   FT+ N
Sbjct: 158 PVVKLGGFTSSASLQAGLMNLATEQAPSTTFHSFFTSPN 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,452,100
Number of Sequences: 27780
Number of extensions: 288028
Number of successful extensions: 858
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)