Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2043
(492 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.25
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.25
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 23 1.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 5.4
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 5.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 7.1
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 7.1
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 9.4
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.8 bits (54), Expect = 0.25
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 273 SVAKVPMPEVAWVNETFPLLASGK-LLDQDVLVH 175
S A P P+V W + F L +G+ ++ Q V VH
Sbjct: 444 SAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVH 477
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 342 TSSGAGIERPHTKASPVDKLGSSSRSALLTISDALAI 452
TSS + P ++ + + G SSRS+L T+ +++
Sbjct: 1822 TSSTSSDISPMSEQKSLPRRGRSSRSSLRTLLPPISV 1858
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.8 bits (54), Expect = 0.25
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 273 SVAKVPMPEVAWVNETFPLLASGK-LLDQDVLVH 175
S A P P+V W + F L +G+ ++ Q V VH
Sbjct: 444 SAAGNPTPQVTWALDGFALPTNGRFMIGQYVTVH 477
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 342 TSSGAGIERPHTKASPVDKLGSSSRSALLTISDALAI 452
TSS + P ++ + + G SSRS+L T+ +++
Sbjct: 1818 TSSTSSDISPMSEQKSLPRRGRSSRSSLRTLLPPISV 1854
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 23.4 bits (48), Expect = 1.3
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -1
Query: 387 VKLWCVVVQSLHHCLLKLVVRH*FTVVNHQR 295
+++W +V+ + +LK VV + T V HQR
Sbjct: 287 IQIWQQIVKFSLNSILKTVVAYGGTSVMHQR 317
Score = 22.6 bits (46), Expect = 2.3
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = +1
Query: 283 KHAVPLVIHHRELM 324
KHA+P++++ R+LM
Sbjct: 224 KHALPIIMNGRDLM 237
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 1.3
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 12/64 (18%)
Frame = -1
Query: 261 VPMPEVAWV--------NETFPLLASGKLLDQDVLVHSLG---CSVWNTFGHEQ-SFMAV 118
VP PEV W ++ L G L ++V G C V NTFGH+ + +
Sbjct: 1303 VPAPEVTWKVRGAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCYVENTFGHDTVTHQLI 1362
Query: 117 VECP 106
V P
Sbjct: 1363 VHAP 1366
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 102 PGTFGADIRSDSGWF 58
PG FG+ + D WF
Sbjct: 104 PGIFGSTCKIDIAWF 118
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPQFIPPNAYKFRPPLNPRFGPTH 182
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 5.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 17 SNSIKHTGDAEDL*NQPESERISA 88
SNSIKH D D + + R S+
Sbjct: 221 SNSIKHESDNSDYSHTTDENRHSS 244
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 142 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 182
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.0 bits (42), Expect = 7.1
Identities = 10/41 (24%), Positives = 16/41 (39%)
Frame = +3
Query: 66 PSQSEYQHQMSLEPGIPLPP*MTVHARMYSKRYSPGCGPIH 188
P Q + + P P P + +A + +P GP H
Sbjct: 145 PMQEQIPRFRHIGPSTPFPRFIPPNAYKFRPPLNPRFGPTH 185
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 20.6 bits (41), Expect = 9.4
Identities = 5/15 (33%), Positives = 9/15 (60%)
Frame = -2
Query: 212 QAVSYWTRMYWSTAW 168
Q + W ++W +AW
Sbjct: 159 QPPNNWLSVFWGSAW 173
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,145
Number of Sequences: 438
Number of extensions: 3875
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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