Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2041
         (587 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0377 + 17343244-17343372,17344316-17344393,17344496-173445...    27   8.4  

>10_08_0377 +
           17343244-17343372,17344316-17344393,17344496-17344558,
           17344836-17344883,17345203-17345349,17346264-17346395,
           17346905-17346945,17347605-17347633,17348969-17349096,
           17349919-17349994,17350111-17350231,17350300-17350399,
           17350491-17350572,17350664-17350746,17351978-17352088,
           17352260-17352311,17352363-17352408,17352652-17352860,
           17353128-17353251,17353667-17353741,17353837-17353891,
           17354476-17354595,17354670-17354762,17354869-17355014,
           17355152-17355329,17356876-17357110,17357824-17357912
          Length = 929

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = -1

Query: 533 RPTIAE----LASRCPRSSFLVFCGTVLRPIFXXXXXXTLNITIDRACRSLTLLLFSTFD 366
           RP IA+    LASRC R    +F  T + P         + I    AC+S+   L   FD
Sbjct: 719 RPDIADDCFLLASRCIRYCPDLFVPTEMFPRLVDCAMVGITIQHREACKSILSFLSDVFD 778

Query: 365 VLR 357
           + +
Sbjct: 779 LAK 781


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,891,275
Number of Sequences: 37544
Number of extensions: 248407
Number of successful extensions: 494
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)