Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2040
         (749 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    47   4e-04
UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    39   0.15 
UniRef50_A4M850 Cluster: Aldehyde oxidase and xanthine dehydroge...    33   7.5  
UniRef50_Q4DCQ5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 47.2 bits (107), Expect = 4e-04
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -2

Query: 631 FLLLSWVDEFSAHLVLSGYWSP 566
           FLLL WVDE +AHLVLSGYWSP
Sbjct: 154 FLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 38.7 bits (86), Expect = 0.15
 Identities = 12/16 (75%), Positives = 15/16 (93%)
 Frame = -2

Query: 442 WWYLPVQTHKRSYHQW 395
           WWYLP +THKRSYH++
Sbjct: 571 WWYLPARTHKRSYHRY 586


>UniRef50_A4M850 Cluster: Aldehyde oxidase and xanthine
           dehydrogenase, molybdopterin binding; n=1; Petrotoga
           mobilis SJ95|Rep: Aldehyde oxidase and xanthine
           dehydrogenase, molybdopterin binding - Petrotoga mobilis
           SJ95
          Length = 730

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 515 GLKYRDCLTLQTETHYCFTTEIGAVVVPTRADSQEVLPPVA-NPQPSNPY 369
           GL Y     L T+  Y   T     ++PT  D  ++ P +  NP PS PY
Sbjct: 629 GLGYGIMEELDTDEGYINNTNFDEYLIPTVKDMPDITPIIVENPDPSGPY 678


>UniRef50_Q4DCQ5 Cluster: Putative uncharacterized protein; n=1;
            Trypanosoma cruzi|Rep: Putative uncharacterized protein -
            Trypanosoma cruzi
          Length = 4702

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -1

Query: 515  GLKYRDCLTLQTETHYCFTTEIGAVVVPTRADSQEVLPPVANPQPSNPYFSLRLYFAGD 339
            G +Y +    +T  H+C      A+ V TR ++ E    + +PQP+     LR    G+
Sbjct: 2226 GKEYNNAKNEETSLHHCLAAAFLALAVTTRIENCEASISMKSPQPAEGEGKLRQRLCGE 2284


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 754,816,219
Number of Sequences: 1657284
Number of extensions: 14647403
Number of successful extensions: 31384
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31381
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)