Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2040
         (749 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA recepto...    29   6.8  
AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA recepto...    29   6.8  
AY616147-1|AAT40460.1|  902|Drosophila melanogaster NMDA recepto...    29   6.8  
AY616146-1|AAT40459.1|  902|Drosophila melanogaster NMDA recepto...    29   6.8  
AY616145-1|AAT40458.1|  902|Drosophila melanogaster NMDA recepto...    29   6.8  
AY616144-1|AAT40457.1|  902|Drosophila melanogaster NMDA recepto...    29   6.8  
AY071586-1|AAL49208.1|  717|Drosophila melanogaster RE64116p pro...    29   6.8  
AY050491-1|AAL12479.1|  902|Drosophila melanogaster glutamate NM...    29   6.8  
AY050490-1|AAL12478.1|  902|Drosophila melanogaster glutamate NM...    29   6.8  
AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7 pr...    29   6.8  
AF381249-1|AAM46167.1|  841|Drosophila melanogaster NMDA recepto...    29   6.8  
AF244351-1|AAF66980.1|  718|Drosophila melanogaster gamma-glutam...    29   6.8  
AE014298-1124|AAS65282.1|  717|Drosophila melanogaster CG2259-PB...    29   6.8  
AE014298-1123|AAF46321.1|  717|Drosophila melanogaster CG2259-PA...    29   6.8  
AE014298-228|AAF45639.3|  902|Drosophila melanogaster CG33513-PB...    29   6.8  
AE014298-227|AAN09051.2|  902|Drosophila melanogaster CG33513-PA...    29   6.8  
AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC...    29   6.8  

>AY616149-1|AAT40462.1| 1070|Drosophila melanogaster NMDA receptor
           subunit 2-3 protein.
          Length = 1070

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 660 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 691


>AY616148-1|AAT40461.1| 1083|Drosophila melanogaster NMDA receptor
           subunit 2-2 protein.
          Length = 1083

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 660 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 691


>AY616147-1|AAT40460.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1f protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AY616146-1|AAT40459.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1e protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AY616145-1|AAT40458.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1d protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AY616144-1|AAT40457.1|  902|Drosophila melanogaster NMDA receptor
           subunit 2-1c protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AY071586-1|AAL49208.1|  717|Drosophila melanogaster RE64116p
           protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 401 PVANPQPSNPYFSLR-LYFAGD*YFPRWIQIKTVVKS 294
           P+A P+P +P  S R LYF  +  FP   + KT+ ++
Sbjct: 158 PLAQPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRN 194


>AY050491-1|AAL12479.1|  902|Drosophila melanogaster glutamate NMDA
           receptor subunitvariant NR2-b protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AY050490-1|AAL12478.1|  902|Drosophila melanogaster glutamate NMDA
           receptor subunitvariant NR2-a protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AL031027-9|CAA19838.1| 1012|Drosophila melanogaster EG:80H7.7
           protein.
          Length = 1012

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 476 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 507


>AF381249-1|AAM46167.1|  841|Drosophila melanogaster NMDA receptor 2
           protein.
          Length = 841

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 418 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 449


>AF244351-1|AAF66980.1|  718|Drosophila melanogaster
           gamma-glutamylcysteine synthetase protein.
          Length = 718

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 401 PVANPQPSNPYFSLR-LYFAGD*YFPRWIQIKTVVKS 294
           P+A P+P +P  S R LYF  +  FP   + KT+ ++
Sbjct: 157 PLAQPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRN 193


>AE014298-1124|AAS65282.1|  717|Drosophila melanogaster CG2259-PB,
           isoform B protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 401 PVANPQPSNPYFSLR-LYFAGD*YFPRWIQIKTVVKS 294
           P+A P+P +P  S R LYF  +  FP   + KT+ ++
Sbjct: 158 PLAQPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRN 194


>AE014298-1123|AAF46321.1|  717|Drosophila melanogaster CG2259-PA,
           isoform A protein.
          Length = 717

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -1

Query: 401 PVANPQPSNPYFSLR-LYFAGD*YFPRWIQIKTVVKS 294
           P+A P+P +P  S R LYF  +  FP   + KT+ ++
Sbjct: 158 PLAQPRPEDPLSSARSLYFPDEAIFPGHPRFKTLTRN 194


>AE014298-228|AAF45639.3|  902|Drosophila melanogaster CG33513-PB,
           isoform B protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AE014298-227|AAN09051.2|  902|Drosophila melanogaster CG33513-PA,
           isoform A protein.
          Length = 902

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 479 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 510


>AE014298-226|AAF45640.2| 1083|Drosophila melanogaster CG33513-PC,
           isoform C protein.
          Length = 1083

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = -1

Query: 98  YTSSSWVLQPGVSLQTALFRAFSFQFLTPTTF 3
           + ++SW+L   V++Q A F  F F++L+P+ +
Sbjct: 660 FDTASWMLVGIVAIQAATFMIFLFEWLSPSGY 691


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,218,500
Number of Sequences: 53049
Number of extensions: 696981
Number of successful extensions: 1450
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1450
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)