Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2036
(729 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 29 0.15
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 28 0.26
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 25 2.4
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 25 2.4
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 25 3.2
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 7.3
AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein. 23 9.7
AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein. 23 9.7
AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein. 23 9.7
AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein. 23 9.7
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 9.7
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 29.1 bits (62), Expect = 0.15
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Frame = -3
Query: 550 WHIYLDGDGSVDW---DMYWVRHLLFDWVGL------RYVNWYLDNLFNWVRDMFDNGVG 398
W +Y G+G D D HL++ + G+ R ++ YLD NW R VG
Sbjct: 40 WAVYRPGNGRYDIEHIDPSLCTHLMYGFFGINEDATVRIIDPYLDLEENWGRGHIKRFVG 99
Query: 397 LGNV 386
L NV
Sbjct: 100 LKNV 103
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 28.3 bits (60), Expect = 0.26
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 343 PLPGRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 522
P R E + R + SP L + TCP+P C SR +++ R A ++C +R
Sbjct: 37 PRTRRSEAVMTRSTPSSPRLAQASTCPVP----CSSIWSRPSSM--RCAPARTASCSTRS 90
Query: 523 T 525
+
Sbjct: 91 S 91
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 725 RVCPHGPLLVLVPLCI 678
++CP P L+LVP CI
Sbjct: 193 KLCPSYPRLLLVPACI 208
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 25.0 bits (52), Expect = 2.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2
Query: 725 RVCPHGPLLVLVPLCI 678
++CP P L+LVP CI
Sbjct: 193 KLCPSYPRLLLVPACI 208
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 24.6 bits (51), Expect = 3.2
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -3
Query: 547 HIYLDGDGSVDWDMYWVRHLLFDWV 473
+I+L DGS+ W VR LLF+ V
Sbjct: 78 NIFLKTDGSLLWKNKPVRELLFEGV 102
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 387 TFPNPTPLSNMSLTQLKRLSRYQFTYRNPTQS 482
TF TP+ + T K YQ+T R P S
Sbjct: 798 TFTKLTPIWRCATTVRKGRKLYQYTIRLPINS 829
>AY334000-1|AAR01125.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 604 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 497
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY333999-1|AAR01124.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 604 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 497
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY333998-1|AAR01123.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 604 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 497
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY333997-1|AAR01122.1| 268|Anopheles gambiae FBN23 protein.
Length = 268
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 604 GHVHFDWNMNFLFNGVRFWHIYLDGDGSVDWDMYWV 497
G + F + N + R W Y +G GSVD + +W+
Sbjct: 174 GWLVFQYRFNGSVDFNRDWVAYRNGFGSVDGE-FWL 208
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.0 bits (47), Expect = 9.7
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 425 KGHV*QRGRVGERALSRGRGFSFLPG 348
KG RG+VGER +G PG
Sbjct: 322 KGQAGDRGQVGERGHKGEKGLPGQPG 347
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,584
Number of Sequences: 2352
Number of extensions: 10461
Number of successful extensions: 92
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -