Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2033
(746 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein. 34 0.62
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein. 34 0.62
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein. 34 0.62
Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein. 33 1.4
S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growt... 33 1.4
BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming gro... 33 1.4
AY311388-1|AAP74958.1| 2551|Homo sapiens FEX2 protein. 33 1.4
AY227444-1|AAO39681.1| 1416|Homo sapiens hyaluronan receptor for... 33 1.4
AK074051-1|BAB84877.1| 1736|Homo sapiens FLJ00122 protein protein. 33 1.4
AK024503-1|BAB15793.1| 1192|Homo sapiens FLJ00112 protein protein. 33 1.4
AJ295695-1|CAC82105.1| 2551|Homo sapiens stabilin-2 protein. 33 1.4
AF160476-1|AAF82398.1| 897|Homo sapiens CD44-like precursor FEL... 33 1.4
AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming gro... 33 1.4
AB052958-1|BAC15608.1| 2551|Homo sapiens FELE-2 protein. 33 1.4
X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein. 32 1.9
L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein. 32 1.9
D87433-1|BAA13377.2| 2589|Homo sapiens KIAA0246 protein protein. 32 1.9
DQ786774-1|ABG91068.1| 2570|Homo sapiens FEX1 protein. 32 1.9
BC150250-1|AAI50251.1| 2570|Homo sapiens stabilin 1 protein. 32 1.9
AJ275213-1|CAB61827.1| 2570|Homo sapiens stabilin-1 protein. 32 1.9
AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein. 32 1.9
AB052956-1|BAC15606.1| 2570|Homo sapiens FELE-1 protein. 32 1.9
Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein. 32 2.5
AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein. 32 2.5
AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein. 32 2.5
AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein. 32 2.5
AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein. 32 2.5
AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein. 32 2.5
X78565-1|CAA55309.1| 2201|Homo sapiens human tenascin-C protein. 31 3.3
X56160-1|CAA39628.1| 2199|Homo sapiens tenascin protein. 31 3.3
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 31 3.3
M55618-1|AAA88083.1| 2203|Homo sapiens hexabrachion protein. 31 3.3
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 3.3
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 31 3.3
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 3.3
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 3.3
AL162425-1|CAI15110.1| 2201|Homo sapiens tenascin C (hexabrachio... 31 3.3
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 31 3.3
AB210038-1|BAE06120.1| 2233|Homo sapiens TNC variant protein pro... 31 3.3
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 31 3.3
M24630-1|AAA52703.1| 1625|Homo sapiens hexabrachion protein. 31 4.4
AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isofo... 31 4.4
AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AL445650-3|CAH70620.1| 1546|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AL358858-1|CAH71587.1| 1546|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (auto... 31 4.4
AF091889-1|AAF75819.1| 1546|Homo sapiens Usher syndrome type IIa... 31 4.4
AF055580-1|AAC23748.2| 1546|Homo sapiens Usher syndrome type IIa... 31 4.4
>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 33.9 bits (74), Expect = 0.62
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 382 ETETGFALLCSCLR--PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSD 209
E+ G +CSC + G Q ++ ++C P C PHG N+ + S C C GY
Sbjct: 787 ESAPGQLPVCSCPQGWQGPRCQQDV-DECAGPAPCGPHGICTNL-AGSFSCTCHGGYTGP 844
Query: 208 YNTDTETPYCRP 173
+ D + C P
Sbjct: 845 -SCDQDINDCDP 855
>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
Length = 2321
Score = 33.9 bits (74), Expect = 0.62
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 382 ETETGFALLCSCLR--PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSD 209
E+ G +CSC + G Q ++ ++C P C PHG N+ + S C C GY
Sbjct: 787 ESAPGQLPVCSCPQGWQGPRCQQDV-DECAGPAPCGPHGICTNL-AGSFSCTCHGGYTGP 844
Query: 208 YNTDTETPYCRP 173
+ D + C P
Sbjct: 845 -SCDQDINDCDP 855
>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
Length = 2281
Score = 33.9 bits (74), Expect = 0.62
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 382 ETETGFALLCSCLR--PGLVTQLNMYEDCNVPVGCAPHGRIDNINSASIRCVCDDGYVSD 209
E+ G +CSC + G Q ++ ++C P C PHG N+ + S C C GY
Sbjct: 747 ESAPGQLPVCSCPQGWQGPRCQQDV-DECAGPAPCGPHGICTNL-AGSFSCTCHGGYTGP 804
Query: 208 YNTDTETPYCRP 173
+ D + C P
Sbjct: 805 -SCDQDINDCDP 815
>Z37976-1|CAA86030.1| 1821|Homo sapiens LTBP-2 precursor protein.
Length = 1821
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 412 NPNTGVWLLAETETGFALLCSCLRPGLVTQLNM----YEDCNVPVGCAPHGRIDNINSAS 245
+P G W + + + C +PG N ++C C HG DN + S
Sbjct: 1268 DPVCGTWKCENSPGSYRCVLGC-QPGFHMAPNGDCIDIDECANDTMCGSHGFCDNTDG-S 1325
Query: 244 IRCVCDDGY 218
RC+CD G+
Sbjct: 1326 FRCLCDQGF 1334
>S82451-1|AAB37459.1| 1821|Homo sapiens latent transforming growth
factor-beta-binding protein-2 protein.
Length = 1821
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 412 NPNTGVWLLAETETGFALLCSCLRPGLVTQLNM----YEDCNVPVGCAPHGRIDNINSAS 245
+P G W + + + C +PG N ++C C HG DN + S
Sbjct: 1268 DPVCGTWKCENSPGSYRCVLGC-QPGFHMAPNGDCIDIDECANDTMCGSHGFCDNTDG-S 1325
Query: 244 IRCVCDDGY 218
RC+CD G+
Sbjct: 1326 FRCLCDQGF 1334
>BC078659-1|AAH78659.1| 1821|Homo sapiens latent transforming growth
factor beta binding protein 2 protein.
Length = 1821
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 412 NPNTGVWLLAETETGFALLCSCLRPGLVTQLNM----YEDCNVPVGCAPHGRIDNINSAS 245
+P G W + + + C +PG N ++C C HG DN + S
Sbjct: 1268 DPVCGTWKCENSPGSYRCVLGC-QPGFHMAPNGDCIDIDECANDTMCGSHGFCDNTDG-S 1325
Query: 244 IRCVCDDGY 218
RC+CD G+
Sbjct: 1326 FRCLCDQGF 1334
>AY311388-1|AAP74958.1| 2551|Homo sapiens FEX2 protein.
Length = 2551
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 2008 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGP-SCDTQ 2044
>AY227444-1|AAO39681.1| 1416|Homo sapiens hyaluronan receptor for
endocytosis precursor protein.
Length = 1416
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 873 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGP-SCDTQ 909
>AK074051-1|BAB84877.1| 1736|Homo sapiens FLJ00122 protein protein.
Length = 1736
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 1193 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGT-SCDTQ 1229
>AK024503-1|BAB15793.1| 1192|Homo sapiens FLJ00112 protein protein.
Length = 1192
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 649 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGP-SCDTQ 685
>AJ295695-1|CAC82105.1| 2551|Homo sapiens stabilin-2 protein.
Length = 2551
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 2008 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGP-SCDTQ 2044
>AF160476-1|AAF82398.1| 897|Homo sapiens CD44-like precursor FELL
protein.
Length = 897
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 354 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGP-SCDTQ 390
>AB209865-1|BAD93102.1| 1700|Homo sapiens latent transforming growth
factor beta binding protein 2 variant protein.
Length = 1700
Score = 32.7 bits (71), Expect = 1.4
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = -2
Query: 412 NPNTGVWLLAETETGFALLCSCLRPGLVTQLNM----YEDCNVPVGCAPHGRIDNINSAS 245
+P G W + + + C +PG N ++C C HG DN + S
Sbjct: 1147 DPVCGTWKCENSPGSYRCVLGC-QPGFHMAPNGDCIDIDECANDTMCGSHGFCDNTDG-S 1204
Query: 244 IRCVCDDGY 218
RC+CD G+
Sbjct: 1205 FRCLCDQGF 1213
>AB052958-1|BAC15608.1| 2551|Homo sapiens FELE-2 protein.
Length = 2551
Score = 32.7 bits (71), Expect = 1.4
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTE 191
DC +P GC+ HG+ D+ + S +C+C+ G+ + DT+
Sbjct: 2008 DC-LPCGCSDHGQCDDGITGSGQCLCETGWTGP-SCDTQ 2044
>X63556-1|CAA45118.1| 3002|Homo sapiens fibrillin protein.
Length = 3002
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -2
Query: 379 TETGFALLCSCLRPGLV---TQLNMYEDC-NVPVGCAPHGRIDNINSASIRCVCDDGYVS 212
T T + CSC PG + + ++C N C+ H N S RC+C +GY
Sbjct: 1471 TNTAGSFKCSC-SPGWIGDGIKCTDLDECSNGTHMCSQHADCKN-TMGSYRCLCKEGYTG 1528
Query: 211 DYNTDTETPYC 179
D T T+ C
Sbjct: 1529 DGFTCTDLDEC 1539
>L13923-1|AAB02036.1| 2871|Homo sapiens fibrillin protein.
Length = 2871
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -2
Query: 379 TETGFALLCSCLRPGLV---TQLNMYEDC-NVPVGCAPHGRIDNINSASIRCVCDDGYVS 212
T T + CSC PG + + ++C N C+ H N S RC+C +GY
Sbjct: 1340 TNTAGSFKCSC-SPGWIGDGIKCTDLDECSNGTHMCSQHADCKN-TMGSYRCLCKEGYTG 1397
Query: 211 DYNTDTETPYC 179
D T T+ C
Sbjct: 1398 DGFTCTDLDEC 1408
>D87433-1|BAA13377.2| 2589|Homo sapiens KIAA0246 protein protein.
Length = 2589
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
GC+PH + C C DGY+ D E C
Sbjct: 1484 GCSPHANCTKVAPGQRTCTCQDGYMGDGELCQEINSC 1520
>DQ786774-1|ABG91068.1| 2570|Homo sapiens FEX1 protein.
Length = 2570
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
GC+PH + C C DGY+ D E C
Sbjct: 1465 GCSPHANCTKVAPGQRTCTCQDGYMGDGELCQEINSC 1501
>BC150250-1|AAI50251.1| 2570|Homo sapiens stabilin 1 protein.
Length = 2570
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
GC+PH + C C DGY+ D E C
Sbjct: 1465 GCSPHANCTKVAPGQRTCTCQDGYMGDGELCQEINSC 1501
>AJ275213-1|CAB61827.1| 2570|Homo sapiens stabilin-1 protein.
Length = 2570
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
GC+PH + C C DGY+ D E C
Sbjct: 1465 GCSPHANCTKVAPGQRTCTCQDGYMGDGELCQEINSC 1501
>AB177803-1|BAD16739.1| 2871|Homo sapiens fibrillin 1 protein.
Length = 2871
Score = 32.3 bits (70), Expect = 1.9
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = -2
Query: 379 TETGFALLCSCLRPGLV---TQLNMYEDC-NVPVGCAPHGRIDNINSASIRCVCDDGYVS 212
T T + CSC PG + + ++C N C+ H N S RC+C +GY
Sbjct: 1340 TNTAGSFKCSC-SPGWIGDGIKCTDLDECSNGTHMCSQHADCKN-TMGSYRCLCKEGYTG 1397
Query: 211 DYNTDTETPYC 179
D T T+ C
Sbjct: 1398 DGFTCTDLDEC 1408
>AB052956-1|BAC15606.1| 2570|Homo sapiens FELE-1 protein.
Length = 2570
Score = 32.3 bits (70), Expect = 1.9
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = -2
Query: 289 GCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETPYC 179
GC+PH + C C DGY+ D E C
Sbjct: 1465 GCSPHANCTKVAPGQRTCTCQDGYMGDGELCQEINSC 1501
>Y14330-1|CAA74706.1| 1223|Homo sapiens jagged2 protein protein.
Length = 1223
Score = 31.9 bits (69), Expect = 2.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C PHGR + + C+CD G+ Y
Sbjct: 591 CGPHGRCVSQPGGNFSCICDSGFTGTY 617
>AF111170-2|AAD15562.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 2.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C PHGR + + C+CD G+ Y
Sbjct: 606 CGPHGRCVSQPGGNFSCICDSGFTGTY 632
>AF029779-1|AAB84216.1| 1200|Homo sapiens hJAG2.del-E6 protein.
Length = 1200
Score = 31.9 bits (69), Expect = 2.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C PHGR + + C+CD G+ Y
Sbjct: 568 CGPHGRCVSQPGGNFSCICDSGFTGTY 594
>AF029778-1|AAB84215.1| 1238|Homo sapiens Jagged2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 2.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C PHGR + + C+CD G+ Y
Sbjct: 606 CGPHGRCVSQPGGNFSCICDSGFTGTY 632
>AF020201-1|AAB71189.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 2.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C PHGR + + C+CD G+ Y
Sbjct: 606 CGPHGRCVSQPGGNFSCICDSGFTGTY 632
>AF003521-1|AAB61285.1| 1238|Homo sapiens Jagged 2 protein.
Length = 1238
Score = 31.9 bits (69), Expect = 2.5
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -2
Query: 286 CAPHGRIDNINSASIRCVCDDGYVSDY 206
C PHGR + + C+CD G+ Y
Sbjct: 606 CGPHGRCVSQPGGNFSCICDSGFTGTY 632
>X78565-1|CAA55309.1| 2201|Homo sapiens human tenascin-C protein.
Length = 2201
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP---YCRPRTVRDVMHDESFFPRA 125
P GC+ HGR +N +CVCD+GY + + P + R R V E F
Sbjct: 409 PNGCSGHGRC--VNG---QCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGY 463
Query: 124 PCAD 113
C+D
Sbjct: 464 DCSD 467
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
D + P C HGR +N CVCDDGY + D + P
Sbjct: 467 DMSCPNDCHQHGRC--VNGM---CVCDDGYTGEDCRDRQCP 502
>X56160-1|CAA39628.1| 2199|Homo sapiens tenascin protein.
Length = 2199
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP---YCRPRTVRDVMHDESFFPRA 125
P GC+ HGR +N +CVCD+GY + + P + R R V E F
Sbjct: 408 PNGCSGHGRC--VNG---QCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGY 462
Query: 124 PCAD 113
C+D
Sbjct: 463 DCSD 466
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
D + P C HGR +N CVCDDGY + D + P
Sbjct: 466 DMSCPNDCHQHGRC--VNGM---CVCDDGYTGEDCRDRQCP 501
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 417 RVTPTRACGCWPKLKLVSLFCAVAYGP-DLL-RSLTCTKIATCP 292
R +PT C CW K K +L DLL R LT T + T P
Sbjct: 1224 RTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTATNLVTLP 1267
>M55618-1|AAA88083.1| 2203|Homo sapiens hexabrachion protein.
Length = 2203
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP---YCRPRTVRDVMHDESFFPRA 125
P GC+ HGR +N +CVCD+GY + + P + R R V E F
Sbjct: 409 PNGCSGHGRC--VNG---QCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGY 463
Query: 124 PCAD 113
C+D
Sbjct: 464 DCSD 467
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
D + P C HGR +N CVCDDGY + D + P
Sbjct: 467 DMSCPNDCHQHGRC--VNGM---CVCDDGYTGEDCRDRQCP 502
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
P C P G ID N + RCVC D V +N + P
Sbjct: 444 PCSCDPSGSIDECNVETGRCVCKDN-VEGFNCERCKP 479
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
P C P G ID N + RCVC D V +N + P
Sbjct: 444 PCSCDPSGSIDECNVETGRCVCKDN-VEGFNCERCKP 479
>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
P C P G ID N + RCVC D V +N + P
Sbjct: 444 PCSCDPSGSIDECNIETGRCVCKDN-VEGFNCERCKP 479
>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
P C P G ID N + RCVC D V +N + P
Sbjct: 444 PCSCDPSGSIDECNIETGRCVCKDN-VEGFNCERCKP 479
>AL162425-1|CAI15110.1| 2201|Homo sapiens tenascin C (hexabrachion)
protein.
Length = 2201
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP---YCRPRTVRDVMHDESFFPRA 125
P GC+ HGR +N +CVCD+GY + + P + R R V E F
Sbjct: 409 PNGCSGHGRC--VNG---QCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGY 463
Query: 124 PCAD 113
C+D
Sbjct: 464 DCSD 467
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
D + P C HGR +N CVCDDGY + D + P
Sbjct: 467 DMSCPNDCHQHGRC--VNGM---CVCDDGYTGEDCRDRQCP 502
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 417 RVTPTRACGCWPKLKLVSLFCAVAYGP-DLL-RSLTCTKIATCP 292
R +PT C CW K K +L DLL R LT T + T P
Sbjct: 1225 RTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTATNLVTLP 1268
>AB210038-1|BAE06120.1| 2233|Homo sapiens TNC variant protein
protein.
Length = 2233
Score = 31.5 bits (68), Expect = 3.3
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = -2
Query: 295 PVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP---YCRPRTVRDVMHDESFFPRA 125
P GC+ HGR +N +CVCD+GY + + P + R R V E F
Sbjct: 441 PNGCSGHGRC--VNG---QCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGY 495
Query: 124 PCAD 113
C+D
Sbjct: 496 DCSD 499
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
D + P C HGR +N CVCDDGY + D + P
Sbjct: 499 DMSCPNDCHQHGRC--VNGM---CVCDDGYTGEDCRDRQCP 534
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 31.5 bits (68), Expect = 3.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = -3
Query: 417 RVTPTRACGCWPKLKLVSLFCAVAYGP-DLL-RSLTCTKIATCP 292
R +PT C CW K K +L DLL R LT T + T P
Sbjct: 1247 RTSPTAYCDCWEKCKCKTLIAGQKSARLDLLYRLLTATNLVTLP 1290
>M24630-1|AAA52703.1| 1625|Homo sapiens hexabrachion protein.
Length = 1625
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 307 DCNVPVGCAPHGRIDNINSASIRCVCDDGYVSDYNTDTETP 185
D + P C HGR +N CVCDDGY + D + P
Sbjct: 37 DMSCPNDCHQHGRC--VNGM---CVCDDGYTGEDCRDRQCP 72
>AY481573-1|AAS47698.1| 5202|Homo sapiens Usher syndrome 2A isoform B
protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL513305-1|CAH73621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL445650-4|CAH70621.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL445650-3|CAH70620.1| 1546|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 1546
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL358858-2|CAH71588.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL358858-1|CAH71587.1| 1546|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 1546
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL358452-1|CAI19189.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AL139259-1|CAI23041.1| 5202|Homo sapiens Usher syndrome 2A (autosomal
recessive, mild) protein.
Length = 5202
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AF091889-1|AAF75819.1| 1546|Homo sapiens Usher syndrome type IIa
protein protein.
Length = 1546
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
>AF055580-1|AAC23748.2| 1546|Homo sapiens Usher syndrome type IIa
protein protein.
Length = 1546
Score = 31.1 bits (67), Expect = 4.4
Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Frame = -2
Query: 586 CSTHSDCNLCREGLANCQLFDEDTIIKMRGDDGQEHETLIRAGESYCLALDRERARSCNP 407
C H NL + +CQ+ + D++ + G T+ CL + + R CN
Sbjct: 882 CEPHR-YNLTIDNFQHCQMCECDSLGTLPG-------TICDPISGQCLCVPNRQGRRCNQ 933
Query: 406 -NTGVWLLAETETGFALLCSCLRPGLVTQLNMYEDCNVPVG-CAPHGRIDNINSASIRC- 236
G ++ TG L CSC G V + CN G C + + A RC
Sbjct: 934 CQPGFYISPGNATG-CLPCSCHTTGAVNHI-----CNSLTGQCV----CQDASIAGQRCD 983
Query: 235 VCDDGYVSDYNTDTETPYCRP 173
C D Y + D +T C+P
Sbjct: 984 QCKDHY---FGFDPQTGRCQP 1001
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,624,333
Number of Sequences: 237096
Number of extensions: 2227829
Number of successful extensions: 6096
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 5295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6096
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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