Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2031
(690 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.051
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 33 0.051
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 31 0.12
SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 30 0.27
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 30 0.36
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 1.9
SPAC4G9.06c |||histone chaperone Chz1 |Schizosaccharomyces pombe... 27 2.6
SPCC4G3.09c |gyp3||GTPase activating protein Gyp3|Schizosaccharo... 27 2.6
SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1 ... 27 3.4
SPCC338.17c |rad21||kleisin|Schizosaccharomyces pombe|chr 3|||Ma... 27 3.4
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 26 4.5
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 26 4.5
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 26 4.5
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 26 5.9
SPAPB1A10.07c |||sphingolipid biosynthesis protein|Schizosacchar... 26 5.9
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 25 7.8
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 25 7.8
SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr 1|... 25 7.8
SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase Pp... 25 7.8
SPAC959.04c |||mannosyltransferase |Schizosaccharomyces pombe|ch... 25 7.8
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 32.7 bits (71), Expect = 0.051
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Frame = +3
Query: 507 DEDQDLSTLETADKEE----DKDKSNYDSLEKLHDITVLEE--DNIGDD--EDMLDVADH 662
DE++DL L A+K++ D+D+S + + ++ + E+ D +GD +D D++D
Sbjct: 4318 DEEEDLQALGNAEKDQIKSIDRDESANQNPDSMNSTNIAEDEADEVGDKQLQDGQDISDI 4377
Query: 663 PESGD 677
++G+
Sbjct: 4378 KQTGE 4382
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Frame = +3
Query: 474 DFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDI-TVLEEDNIGDD----E 638
D K E +D DL ++ +E+K++++ + E + D LEE+N D+ +
Sbjct: 4089 DLKLDEKEGDVSKDSDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQD 4148
Query: 639 DMLDVADHPE 668
D D+A+ E
Sbjct: 4149 DFSDLAEDDE 4158
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 32.7 bits (71), Expect = 0.051
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +3
Query: 471 NDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDED 641
N+ P A E + D ++ DK ++ K D++VLEED+ +DED
Sbjct: 217 NNAAPPPPLAQAQEQLSTENEDEFDIDDTTDKMTTFTMNKFADLSVLEEDDDDEDED 273
Score = 27.9 bits (59), Expect = 1.5
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = +3
Query: 489 EDTIYADEDQDLSTLETADKEEDKD---KSNYDSLE-----KLHDITVLEEDNIGDDED 641
ED DED++L E ++EE+K+ SNYD E L D LE D DD D
Sbjct: 265 EDDDDEDEDEELEG-EKEEEEEEKEKPEISNYDETEGKVNFSLEDSESLEFDEGSDDYD 322
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 570 NYDSLEKLHDITVLEEDNIGDDEDMLDVADHPESGD 677
N DSL + D +LEED D+E++L + D + +
Sbjct: 333 NTDSLAEDED-DILEEDEDEDEEELLAIFDASDDSE 367
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 31.5 bits (68), Expect = 0.12
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 483 PMEDTIYADED---QDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDV 653
P + TI ED ++ + DK+ED+D N + E+ D EE++ DDE+ D
Sbjct: 69 PNDTTINKGEDGNENEVDNVNNNDKKEDED--NVEENEEEADANEEEEEDEEDDEE--DE 124
Query: 654 ADHPESG 674
D ESG
Sbjct: 125 EDEDESG 131
>SPCC645.12c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 198
Score = 30.3 bits (65), Expect = 0.27
Identities = 16/77 (20%), Positives = 41/77 (53%)
Frame = +3
Query: 417 AMSANVKLLNQKYNNKHFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLH 596
+++ N +L+ +++N+ N+ +E+ E A+K+E+ + ++ D +++
Sbjct: 82 SIAKNKELIEEEWNDFQ-NEIGIIEENAVEQEITLQQQQLLAEKDEENEIADNDLEPEVY 140
Query: 597 DITVLEEDNIGDDEDML 647
DI EE +G+ D++
Sbjct: 141 DILYEEESKLGESRDLI 157
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 29.9 bits (64), Expect = 0.36
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +3
Query: 489 EDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDM 644
E +ADE D E +EED S +DS E+ H++ + D+ GD+ED+
Sbjct: 86 EPQTFADEFIDDEAKECEGEEED---SVFDSDEE-HEVKPMFSDDSGDEEDL 133
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.5 bits (58), Expect = 1.9
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 486 MEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDE--DMLDVAD 659
+E T+ DE+ S E D +E K +EK+ T +E I + + D LD+ D
Sbjct: 161 LETTLKGDENYSSSQKEIYDNDETIPKPPSPEVEKIETSTSVENAYITNSQYNDTLDMED 220
>SPAC4G9.06c |||histone chaperone Chz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 113
Score = 27.1 bits (57), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 420 MSANVKLLNQKYNNKHFNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHD 599
MS K ++ K + D P D ++D D L ++ + +D D S + + +HD
Sbjct: 1 MSEEPKKIDIKGKGRAIEDLIPDIDD--EEDDVDFQDLSSSGESDDSDDSMQEDYDDIHD 58
>SPCC4G3.09c |gyp3||GTPase activating protein
Gyp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +3
Query: 486 MEDTIYADEDQDLS--TLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLD 650
M D + +E+ LS ++ E+DK S+Y+ L D+ L D DD D D
Sbjct: 11 MNDANFKEENAHLSDASIHFGSSEQDKTPSDYE----LDDVLDLYNDTTEDDADDAD 63
>SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 26.6 bits (56), Expect = 3.4
Identities = 7/33 (21%), Positives = 22/33 (66%)
Frame = +3
Query: 378 LRSEIDDLTANMIAMSANVKLLNQKYNNKHFND 476
++ ++D++ +++ +S+ + ++YN KH N+
Sbjct: 1 MKKDLDEIDTDIVTLSSFILQEQRRYNQKHKNE 33
>SPCC338.17c |rad21||kleisin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 628
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 261 LSGLRTASQNHHPSSSWTHPSLPSWFPFACTS 166
LSG+ P+SS TH S PS P TS
Sbjct: 241 LSGIIGPQMTKSPASSVTHFSTPSMLPIGGTS 272
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 26.2 bits (55), Expect = 4.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 492 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLH 596
D + +DED D ST + ++ K+ + + E +H
Sbjct: 407 DLVMSDEDDDDSTFSDKNSKDFKETEDMNGAEDMH 441
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 468 FNDFKPMEDTIYADEDQDLSTLETADKEEDKDKSNYDSLE 587
+ D+ +D +ED + D +D D S+ DSLE
Sbjct: 307 YPDYAVKQDETVVEEDGSSGEGDWEDVSDDSDNSSLDSLE 346
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 26.2 bits (55), Expect = 4.5
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 504 ADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDMLDVAD-HPESG 674
ADE+ D LE+ D+E D N D + + D +++++ DD+D ++ ++ H SG
Sbjct: 350 ADEEDDGEDLESEDEEVD----NSDDIVEDGDNAFVDDED--DDKDSVNASNTHRSSG 401
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +3
Query: 492 DTIYADEDQDLSTLETADKEEDKDKSNYDSLEKL 593
DT+ + + D T +T++K+E ++ + LEKL
Sbjct: 64 DTMEDENENDEDTEQTSEKKETEETPKENPLEKL 97
>SPAPB1A10.07c |||sphingolipid biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 441
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +3
Query: 498 IYADE-DQDLST-LETADKEEDKDKSNYD 578
+YAD D +ST LE EEDK +S+Y+
Sbjct: 337 LYADSHDMGVSTPLEDGSSEEDKHQSDYN 365
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 471 NDFKPMEDTIYAD-EDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNIGDDEDML 647
+ + +D +Y D D + + ++D+ S +S E+ D+ EE+ DDE+
Sbjct: 206 SQYNDQDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDEDVD--EEEEEDDDENND 263
Query: 648 DVADHPES 671
+ D E+
Sbjct: 264 EGDDEDEN 271
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 25.4 bits (53), Expect = 7.8
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 147 LIPDPITMYTQKETMKEVKDASKNLM 224
L PDP +QK T+K+ K A L+
Sbjct: 771 LAPDPPPFTSQKITLKQTKQADMRLL 796
>SPAC22H10.08 |||DUF2009 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 492
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = -2
Query: 323 PNDSRSHRHYP--SFHSPIALVHCRASVLPLKITTHQVLGRILHFL 192
PN+S++ P F SP+ L RA V+PL++ + ++LH L
Sbjct: 16 PNESKTGNESPEKKFSSPVLLQ--RAKVIPLRLEYEE--RKLLHLL 57
>SPCC1919.01 |ppk34|SPCC830.12|serine/threonine protein kinase
Ppk34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 25.4 bits (53), Expect = 7.8
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 486 MEDTIYADEDQDLSTLETADKEEDKDKSNYDSLEKLHDITVLEEDNI 626
+E + + D D ST+E + ++K Y ++L + VL+ +N+
Sbjct: 87 LEKELGSFNDMDSSTIEDQIRNQEKKDPYYYIRKELDVLKVLDHENV 133
>SPAC959.04c |||mannosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 298
Score = 25.4 bits (53), Expect = 7.8
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -2
Query: 131 HHCVNTAPANGRCHC 87
H+C T P GRC C
Sbjct: 283 HYCPETIPYTGRCAC 297
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,599,446
Number of Sequences: 5004
Number of extensions: 53966
Number of successful extensions: 238
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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