SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-2019
         (554 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   1.6  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    23   2.7  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   4.8  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   4.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.8  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   4.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.8  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   6.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   6.3  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    21   6.3  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   6.3  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    21   6.3  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    21   6.3  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    21   6.3  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    21   6.3  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   6.3  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    21   6.3  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   6.3  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    21   6.3  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    21   6.3  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    21   6.3  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    21   6.3  
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    21   6.3  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   6.3  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    21   6.3  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    21   6.3  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    21   6.3  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    21   6.3  
AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex det...    21   6.3  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   6.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   6.3  
EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor 1-a...    21   8.4  
AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor 1-a...    21   8.4  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    21   8.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -3

Query: 219 TDKLQ*VQASSRIFRRQLESGLNALHADFDTLS 121
           +D +   +  SRI   ++ S LNA+++ FDTL+
Sbjct: 428 SDVVTFTEICSRITPMEVVSMLNAMYSLFDTLT 460


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 232 PPANKAEAERLKNEGNELMKAERYNEA 312
           PP ++A  E +K E +  +K   YN A
Sbjct: 160 PPYSEARFEEIKKEVSSYIKKIGYNTA 186


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 9   TRAILKNRNVKRNQNSCSEYRELSK 83
           +R+  + +   +N+NS  +YRE SK
Sbjct: 40  SRSREREKKSYKNENSYRKYRETSK 64


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 9   TRAILKNRNVKRNQNSCSEYRELSK 83
           +R+  + +   +N+NS  +YRE SK
Sbjct: 40  SRSREREKKSYKNENSYRKYRETSK 64


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 9   TRAILKNRNVKRNQNSCSEYRELSK 83
           +R+  + +   +N+NS  +YRE SK
Sbjct: 40  SRSREREKKSYKNENSYRKYRETSK 64


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 9   TRAILKNRNVKRNQNSCSEYRELSK 83
           +R+  + +   +N+NS  +YRE SK
Sbjct: 40  SRSREREKKSYKNENSYRKYRETSK 64


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 9   TRAILKNRNVKRNQNSCSEYRELSK 83
           +R+  + +   +N+NS  +YRE SK
Sbjct: 273 SRSREREKKSYKNENSYRKYRETSK 297



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
          determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42 RNQNSCSEYRELSK 83
          +N+NS  +YRE SK
Sbjct: 51 KNENSYRKYRETSK 64


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
          determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42 RNQNSCSEYRELSK 83
          +N+NS  +YRE SK
Sbjct: 51 KNENSYRKYRETSK 64


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 273 KNENSYRKYRETSK 286


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 273 KNENSYRKYRETSK 286


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 289 KNENSYRKYRETSK 302


>AY352276-1|AAQ67417.1|  385|Apis mellifera complementary sex
           determiner protein.
          Length = 385

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 252 SRTTQERRQRAHES*ALQRSA*KVHAR 332
           SRT +ER Q   E+  +Q+   + H R
Sbjct: 29  SRTKEERLQHRREAWLIQQEREREHQR 55



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 42  RNQNSCSEYRELSK 83
           +N+NS  +YRE SK
Sbjct: 284 KNENSYRKYRETSK 297


>EF013389-1|ABK54743.1|  172|Apis mellifera elongation factor
           1-alpha protein.
          Length = 172

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 232 PPANKAEAERLKNEGNELMKAERYNEA 312
           PP ++   E +K E +  +K   YN A
Sbjct: 87  PPYSETRFEEIKKEVSSYIKKIGYNPA 113


>AY208278-1|AAO48970.1|  274|Apis mellifera elongation factor
           1-alpha protein.
          Length = 274

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 232 PPANKAEAERLKNEGNELMKAERYNEA 312
           PP ++   E +K E +  +K   YN A
Sbjct: 103 PPYSETRFEEIKKEVSSYIKKIGYNPA 129


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 232 PPANKAEAERLKNEGNELMKAERYNEA 312
           PP ++   E +K E +  +K   YN A
Sbjct: 160 PPYSETRFEEIKKEVSSYIKKIGYNPA 186


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.132    0.372 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,248
Number of Sequences: 438
Number of extensions: 2297
Number of successful extensions: 42
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)

- SilkBase 1999-2023 -