Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2018
(683 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 47 1e-05
03_02_0484 + 8805053-8805538 47 2e-05
03_02_0478 + 8775892-8776377 46 2e-05
03_02_0485 - 8808139-8808618 45 5e-05
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 45 6e-05
01_01_0229 - 1943473-1943922 45 6e-05
01_01_0231 + 1951047-1951499 44 1e-04
01_01_0227 + 1933247-1933699 41 8e-04
02_02_0077 - 6586638-6587165 39 0.003
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 39 0.004
02_01_0222 + 1450233-1450766 37 0.017
11_02_0041 - 7669692-7670312 33 0.21
06_01_1017 - 7951985-7952425 33 0.28
03_05_0543 - 25404630-25405408,25405461-25405605 32 0.37
02_01_0760 - 5639315-5639685,5640072-5640360 31 0.85
12_02_1174 - 26696869-26698191 30 2.0
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 29 2.6
05_07_0296 - 29061900-29061923,29062026-29062440,29062529-290625... 29 2.6
11_04_0364 - 16791774-16792490,16792545-16793561,16793856-167939... 29 3.4
09_04_0308 + 16567361-16568854,16568946-16569068,16569372-165696... 29 3.4
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 29 3.4
12_01_0946 + 9376037-9376318 28 7.9
08_01_0539 + 4679392-4681282,4682060-4682104,4682403-4683560,468... 28 7.9
05_03_0001 - 7269231-7269436,7269536-7270100,7270600-7270821,727... 28 7.9
>03_02_0483 - 8804021-8804485
Length = 154
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +2
Query: 275 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 430
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 431 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+++ + +GVLTV P+ + +++ IT
Sbjct: 123 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIT 153
>03_02_0484 + 8805053-8805538
Length = 161
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +2
Query: 275 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 430
DV EE+ V+ DG V+ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 431 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+++ + +GVLTV P+ + +++ +T
Sbjct: 130 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQVT 160
>03_02_0478 + 8775892-8776377
Length = 161
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Frame = +2
Query: 275 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 430
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LP+N P+
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 431 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+++ + +GVLTV P+ A + +++ I+
Sbjct: 130 QIKASM-ENGVLTVTVPKEEAKKPDVKSIQIS 160
>03_02_0485 - 8808139-8808618
Length = 159
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/92 (29%), Positives = 50/92 (54%), Gaps = 8/92 (8%)
Frame = +2
Query: 275 DVQHFSPEEISVKTADGYVI-VEGKH----EERQDEHGYISR---QFTRRYALPENCNPD 430
DV EE+ V+ DG ++ + G+ EE+ D+ + R +F RR+ LPEN P+
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 431 TVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+++ + +GVLTV P+ + +++ I+
Sbjct: 128 QIKASM-ENGVLTVTVPKEEPKKPDVKSIQIS 158
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +2
Query: 209 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 373
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 374 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+ R QF RR+ LPEN D V++ L +GVLTV P+ +A+ I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +2
Query: 209 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 373
A AN V T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 38 AFANARVDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 95
Query: 374 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+
Sbjct: 96 RVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148
>01_01_0231 + 1951047-1951499
Length = 150
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 8/114 (7%)
Frame = +2
Query: 209 AIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIV-----EGKHEERQDEHG 373
A AN + T F+ D+ EE+ V+ +G V+V + E++ D+
Sbjct: 39 AFANARIDWKETPESHVFKA--DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 374 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 526
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0227 + 1933247-1933699
Length = 150
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 335 VEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 514
V+GK++ER S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 515 VPIT 526
+PI+
Sbjct: 146 IPIS 149
>02_02_0077 - 6586638-6587165
Length = 175
Score = 39.1 bits (87), Expect = 0.003
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Frame = +2
Query: 137 PDDLLTAVITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKT 316
PD+L + PT R Y R + MA DV S + +D+ +P ++ V+
Sbjct: 25 PDELERQLNPPT--RAYVRDRRAMANTPMDVKELRASGA--LVLAVDMPGVAPADVRVEV 80
Query: 317 ADGYVIVEGKHEERQ----DEHG----YISRQ-----FTRRYALPENCNPDTVESRLSSD 457
DG V+ R D+ G Y+ + F RR+ LPE+ + D V + D
Sbjct: 81 EDGNVLAISGERRRPAGDGDDGGEGVKYLRMERRMGKFMRRFPLPESADLDGVRAEY-KD 139
Query: 458 GVLTV-IAPRTPAATKNERAVPITQTG 535
GVLTV + + P K R V + G
Sbjct: 140 GVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 10/113 (8%)
Frame = +2
Query: 194 PWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDE-- 367
P + +A + + + + ++ D+ S EE+ V D +++ G+H++ + E
Sbjct: 122 PRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGA 181
Query: 368 ----HGYISRQ----FTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATK 502
G+ + + R ALP+ C+ V + L +GVL V P+T K
Sbjct: 182 EGSGDGWWKERSVSSYDMRLALPDECDKSKVRAEL-KNGVLLVTVPKTEVERK 233
>02_01_0222 + 1450233-1450766
Length = 177
Score = 36.7 bits (81), Expect = 0.017
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Frame = +2
Query: 296 EEISVKTADGYVI-VEGKHEERQDEHGY-------ISRQFTRRYALPENCNPDTVESRLS 451
EE+ V+ + V+ + G+ +E G S +F R LP N N D V + L
Sbjct: 93 EEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALD 152
Query: 452 SDGVLTVIAPRTPAATKNERAVPIT 526
+ GVLT+ P+ + R +PIT
Sbjct: 153 N-GVLTITIPKDNDRKPHARIIPIT 176
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 386 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNE-RAVPITQTG 535
+F RR+ +P + V +RL DGVLTV P+ P E R V I G
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAG 190
>06_01_1017 - 7951985-7952425
Length = 146
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 302 ISVKTADGYVIVEGKHEERQDEHGYISR----QFTRRYALPENCNPDTVESRLSSDGVLT 469
++V+ A + E + E +D +++ +F R ALP + + + + + GVLT
Sbjct: 65 LTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDN-GVLT 123
Query: 470 VIAPRTPAATKNERAVPI 523
V+ P+ PA + R PI
Sbjct: 124 VVVPKEPAPAR-PRTRPI 140
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 32.3 bits (70), Expect = 0.37
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 4/109 (3%)
Frame = +2
Query: 254 DKFQVNLDVQHFSPEEISVKTAD-GYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPD 430
+ ++LD F EEI V + G++ G ER SR F + + LP +CN D
Sbjct: 39 NSIHLSLDQLGFKREEIRVLVDNHGHLRTRG---ERPVAGNRWSR-FQKDFQLPADCNVD 94
Query: 431 TVESRLSSDGVLTVIAPRTPA-ATKNERAVPIT--QTGPVRKEIKEPTA 568
+ ++ ++ + + +TP+ T + P+T P + E + P A
Sbjct: 95 GIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPPQPEPRRPPA 143
>02_01_0760 - 5639315-5639685,5640072-5640360
Length = 219
Score = 31.1 bits (67), Expect = 0.85
Identities = 22/109 (20%), Positives = 52/109 (47%), Gaps = 8/109 (7%)
Frame = +2
Query: 221 RDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGYVIVEGK-----HEER-QDEHG--Y 376
R + + +++++++ +V +++ V DG + + G+ E+R +D G +
Sbjct: 111 RPLTGKVREDEERYRLRFEVPGLGKDDVRVYVDDGVLAIHGEKRDVVEEDRGRDGDGECW 170
Query: 377 ISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPI 523
+ + LPE+ + + + + DGVL V PR+P ++ V +
Sbjct: 171 AAATYHAGLLLPEDAVAEGITAEVR-DGVLHVTVPRSPERKRSVTEVKV 218
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/101 (24%), Positives = 42/101 (41%)
Frame = +2
Query: 266 VNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYALPENCNPDTVESR 445
V + + F E++ V+ D + ++ E G +F + LP+NC+ D V +R
Sbjct: 26 VEIALPGFRKEQVRVQV-DNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 446 LSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTA 568
D L + P A AV + ++ E K P A
Sbjct: 85 F-DDHKLIITLPLVAA------AVDVDESSATSPEFKTPPA 118
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 87 DTNRTAFAIRTSDWRLLRTIS*RPSSRQRCPEITTVRGSRWRSPIETSVPPSPRIRINS 263
D NRT F R + LR ++ S R+ P+I VR + + P + P+PRI +++
Sbjct: 47 DKNRTGFLGREDFYNALRLVTVAQSGRELTPDI--VRSALY-GPAAAKI-PAPRINVST 101
>05_07_0296 -
29061900-29061923,29062026-29062440,29062529-29062566,
29062689-29062741,29062851-29063034,29064486-29064669,
29064761-29064916,29064998-29065173,29065277-29065454,
29066015-29066421
Length = 604
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +2
Query: 311 KTADGYVIVEGKHEERQDEHGYISRQFTRRYALPE------NCNPDTVESRLSSDGV-LT 469
+TA GY+ + E R+D H + TR+ + + C P T+++ + G+ +
Sbjct: 343 RTAVGYLDITRLSELRRDAHPSVFTPSTRKRDVKKLVQEHSPCQPSTLQADAYTTGLSMK 402
Query: 470 VIAPRTPAATKNERAVPITQTGPVRKEIKE 559
I R N+ VP T+ + KE KE
Sbjct: 403 EIERRRKIGAANKGKVPWTKGRKLSKEHKE 432
>11_04_0364 - 16791774-16792490,16792545-16793561,16793856-16793920,
16794787-16796964,16797065-16797322,16799815-16800172
Length = 1530
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 589 CFVALSSRSGLLNLLPDRAGLSDGNSSLVL 500
C + S SG+L+LL R G SDGN ++L
Sbjct: 1496 CEEGILSWSGILSLLITRKGNSDGNDLIIL 1525
>09_04_0308 + 16567361-16568854,16568946-16569068,16569372-16569649,
16570316-16571924,16572363-16573781
Length = 1640
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -2
Query: 589 CFVALSSRSGLLNLLPDRAGLSDGNSSLVL 500
C + S SG+L+LL R G SDGN ++L
Sbjct: 1081 CEEGILSWSGILSLLITRKGNSDGNDLIIL 1110
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 362 DEHGYISRQFTRRYA-LPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGP 538
D+ + + FTR Y+ N RL + ++ P + K++ V T P
Sbjct: 323 DDISTVCKWFTREYSDTTYGKNAQLAAKRLKATQPIST-QPDKEESNKDDLFVEPIYTIP 381
Query: 539 VRKEIKEPTAGAESNETK 592
+KE +PT ESN T+
Sbjct: 382 AKKEEVQPTKDLESNSTE 399
>12_01_0946 + 9376037-9376318
Length = 93
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 158 VITPTMSRDYYRPWKQMAIANRDVGSTITSNKDKFQVNLDVQHFSPEEISVKTADGY 328
++T T S RPWK N D T T + + + +++ +P +I + GY
Sbjct: 2 IVTTTSSTTTTRPWKTPTRENHDNQHTPTRSHN---IQANIRQDTPPDIDFRDRHGY 55
>08_01_0539 +
4679392-4681282,4682060-4682104,4682403-4683560,
4683834-4684204,4684290-4684835,4684927-4685027,
4685117-4685933,4686025-4686213,4686313-4686384,
4686477-4686587,4686647-4686652,4686694-4686794,
4687714-4687813,4687891-4687986,4688157-4688273,
4688367-4688492,4688566-4688619,4688745-4688992,
4689087-4689195,4689284-4689583,4689799-4689963
Length = 2240
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)
Frame = +1
Query: 40 RMLK*SKNVSAAIHPGIPTEPPSRSGL-------RTGAYSGRSPDGRHHANDVQRL 186
R++K + I P + PPSRS R+ + G S +HH +D Q L
Sbjct: 811 RVVKDQSSSELRIKPKVADRPPSRSSRSHSIGTDRSSTHEGSSHSKKHHEHDSQSL 866
>05_03_0001 -
7269231-7269436,7269536-7270100,7270600-7270821,
7270913-7271155,7271227-7271481,7272017-7272370,
7273082-7273164,7273250-7273630,7273874-7274027
Length = 820
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = +1
Query: 91 PTEPPSRSGLRTGAYSGRSPDGRHHANDVQRLLPSVEADGD 213
P + G R A P+G A D + L+ E+DG+
Sbjct: 60 PRRSGAEQGARRAAAGSEKPEGSEEAEDEEFLVEEYESDGE 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,894,024
Number of Sequences: 37544
Number of extensions: 379515
Number of successful extensions: 1407
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -