Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2017
(640 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 202 4e-53
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 91 1e-19
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 55 8e-09
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 53 3e-08
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 52 5e-08
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 39 5e-04
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 32 0.061
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 29 0.75
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 29 0.75
SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain protein|Schizosacchar... 28 0.99
SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.3
SPBC32H8.09 |||WD repeat protein, human WDR8 family|Schizosaccha... 27 1.7
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 27 2.3
SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces pomb... 26 4.0
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 25 7.0
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 7.0
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 25 7.0
SPAC3H8.06 |aur1||inositol phosphorylceramide synthase |Schizosa... 25 7.0
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 25 7.0
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 9.2
SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|ch... 25 9.2
SPCC126.14 |prp18||U5 snRNP-associated protein Prp18|Schizosacch... 25 9.2
SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyce... 25 9.2
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 202 bits (492), Expect = 4e-53
Identities = 96/134 (71%), Positives = 116/134 (86%)
Frame = +2
Query: 239 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 418
E DLY ++K L+R LE L++QE +IK++ ++LK+E + AQEEVKRIQSVPLVIGQFLEA
Sbjct: 5 EEIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEA 64
Query: 419 VDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQ 598
+DQNT IVGSTTGSNY VRILST+DRELLKPSASVAL +HSNALVD+L ADSSISML+
Sbjct: 65 IDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLR 124
Query: 599 ADEKPDVQYSDIGG 640
DE+PDV Y+D+GG
Sbjct: 125 PDERPDVSYADVGG 138
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 91.1 bits (216), Expect = 1e-19
Identities = 46/127 (36%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Frame = +2
Query: 269 KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV---PLVIGQFLEAVDQNTGI 439
K+QR+ + L ++EEY+++++R LK + QEE R+ + P+ +G E +D + I
Sbjct: 71 KMQRIHDHLLMEEEYVQNQER-LKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAI 129
Query: 440 VGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQADEKPDV 619
V ST G YYV I+S +D+++L+P SV LH + ++V +L D I++++ D+ P
Sbjct: 130 V-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTE 188
Query: 620 QYSDIGG 640
Y+DIGG
Sbjct: 189 SYADIGG 195
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 55.2 bits (127), Expect = 8e-09
Identities = 30/134 (22%), Positives = 66/134 (49%)
Frame = +2
Query: 239 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 418
E + KYK + + + ++ R+L K+Y ++++K +QSV +IG+ L+
Sbjct: 3 ERDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQ 62
Query: 419 VDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQ 598
+D IV +++G Y V + +D+ L V+L + ++ +L D + +
Sbjct: 63 LDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMS 122
Query: 599 ADEKPDVQYSDIGG 640
++ D+ ++ +GG
Sbjct: 123 IEDPGDISFAGVGG 136
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 53.2 bits (122), Expect = 3e-08
Identities = 38/190 (20%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Frame = +2
Query: 134 IETMEEIGIILPEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEY 313
+ T+EE+ + + ++++GL Q ++L ++ + L+ ++ ++ + +
Sbjct: 1 MSTLEELDALDQSQQGGSSNNEGLDGI-EQEILAAGIDELNSRTRLLENDIKVMKSEFQR 59
Query: 314 IKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVD-------------QNT------- 433
+ E+ + ++ QE++ + +P ++G +E +D QN+
Sbjct: 60 LTHEKSTMLEKIKENQEKISNNKMLPYLVGNVVEILDMQPDEVDVQESANQNSEATRVGK 119
Query: 434 -GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQADEK 610
++ ++T ++ ++ ++ E L P + ++K S ++D L S DS + ++ DEK
Sbjct: 120 SAVIKTSTRQTIFLPLIGLVEPEELHPGDLIGVNKDSYLIIDKLPSEYDSRVKAMEVDEK 179
Query: 611 PDVQYSDIGG 640
P +YSDIGG
Sbjct: 180 PTERYSDIGG 189
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 52.4 bits (120), Expect = 5e-08
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +2
Query: 320 DEQRN-LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDR 496
+ QRN L +EE++ +Q +G+ ++ + +N +V Y V I ID
Sbjct: 42 EAQRNGLNARVRLLREEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDI 101
Query: 497 ELLKPSASVALHKHSNALVDVLASGADSSISMLQADEKPDVQYSDIGG 640
+ +KP+ VAL S L+ +L + D +S++ ++ PD Y +GG
Sbjct: 102 KEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGG 149
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +2
Query: 413 EAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISM 592
++ ++N ++ + + V + + ++ V ++ A+ L D S++M
Sbjct: 108 QSAEKNAYVINLKQIAKFVVSLGERVSPTDIEEGMRVGCDRNKYAIQLPLPPKIDPSVTM 167
Query: 593 LQADEKPDVQYSDIGG 640
+Q +EKPDV Y D+GG
Sbjct: 168 MQVEEKPDVTYGDVGG 183
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 32.3 bits (70), Expect = 0.061
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 451 GAANYACILINCLK-KLSNDKRNRLYALYFFLCMQIFFLQVSLFIFNVLFLY 299
G Y C+++ + ++N +N+ A FF C+ + F Q++L+ +F Y
Sbjct: 182 GHFQYNCVMLGLVMYAIANLLKNQYVAATFFFCLALTFKQMALYFAPPIFFY 233
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 28.7 bits (61), Expect = 0.75
Identities = 34/154 (22%), Positives = 69/154 (44%), Gaps = 3/154 (1%)
Frame = +2
Query: 164 LPEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKK 343
L +K + +TD+ +S +E S+++ TK + + + +K E+ L +
Sbjct: 317 LQDKLELLTDAYNREKRRARSLEERMSKEMLTKLGESNVDDGMAASRYDTVKREKERLSE 376
Query: 344 EYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASV 523
QE+ + IQSV + +D+ + I+ + +L+ + +LK
Sbjct: 377 HLKSLQEQYEHIQSVYKNV-----LLDRESYIMRLGNKISENNELLN--ENRVLKEKLQT 429
Query: 524 ALHKHSNALVDVLASGADSS---ISMLQADEKPD 616
L K + + + S A++S +SM +ADE+ D
Sbjct: 430 YLDKKESNVTSKIKSTAENSSKPLSMNEADERKD 463
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 28.7 bits (61), Expect = 0.75
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +2
Query: 221 QSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKD--EQRNLKKEYLHAQEEVKRI 379
QSF E E E TK+K L R LE E +K E +E L ++E RI
Sbjct: 36 QSFREKELEGSQTKFKVLSRKLEISTQAMESLKQTAESSQHAEEILSREKEKFRI 90
>SPCC1827.07c ||SPCP1E11.01c|SPX/EXS domain
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 682
Score = 28.3 bits (60), Expect = 0.99
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 382 LYALYFFLCMQIFFLQVSLFIFNVLFL 302
+++L+FFLCM+ FF +++ F LFL
Sbjct: 360 IFSLFFFLCMRNFFPGFTIY-FPALFL 385
>SPAC17G8.12 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 608
Score = 27.9 bits (59), Expect = 1.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 506 KPSASVALHKHSNALVDVLASGADSSISMLQADEKPDVQY 625
KPS++V+ S+A DV+ + S+I+ D K DV +
Sbjct: 244 KPSSNVSRGTPSSAHSDVIEISSSSAIARTSGDRKDDVLF 283
>SPBC32H8.09 |||WD repeat protein, human WDR8
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.5 bits (58), Expect = 1.7
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = -2
Query: 372 FTSSCACKYSFFKFRCSSLMYSSCTSKNSNILW 274
F C S +F C ++ TSK N+LW
Sbjct: 313 FPEPSFCSASKIRFNCDETYAATITSKYPNVLW 345
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 2.3
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 170 EKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 349
EK+ + K L A + E+E L + Q+ LE +E K E++ LK+E
Sbjct: 593 EKEKKRDKKKQLKLAKEEERQRREAERLAEQ--AAQKALEAKRQEEARKKREEQRLKREQ 650
Query: 350 LHAQEEVKR 376
Q+E++R
Sbjct: 651 EKKQQELER 659
>SPAC19G12.08 |||fatty acid hydroxylase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 347
Score = 26.2 bits (55), Expect = 4.0
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 338 KKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGI 439
K ++ A E+ + VPL +F + VDQN G+
Sbjct: 51 KSKHSEAVVEILKSAKVPLKNKEFSDLVDQNIGV 84
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 25.4 bits (53), Expect = 7.0
Identities = 24/129 (18%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Frame = +2
Query: 239 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 418
E D+ + +K + L+ + E ++D RN+ E + +++E+K + V + +++
Sbjct: 124 EHLDIKKRLEKSDETVCKLKEENENLQDMLRNVGNELVESRDEIKELIEKQKVQKESVKS 183
Query: 419 VDQNTGIV---------GSTTGSNYYVRILSTIDRELLKP--SASVAL-----HKHSNAL 550
+ V S + ++ ++S I +EL+ + +V L H+H + +
Sbjct: 184 HESELSSVMSSEILPKASSDSAGSFEPPVISNISKELINKEYARNVLLQFLENHEHRDKI 243
Query: 551 VDVLASGAD 577
+ +L++ D
Sbjct: 244 LPILSTALD 252
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 368 VKRIQSVPLVIGQFLEAVDQN 430
+K+ +SVP + GQF+E V+ N
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN 213
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 25.4 bits (53), Expect = 7.0
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 245 EDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 385
E+ + QR +E QEE IK+E+ ++E +EEV +S
Sbjct: 333 EEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEE--EEEEEVPNYES 377
>SPAC3H8.06 |aur1||inositol phosphorylceramide synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 422
Score = 25.4 bits (53), Expect = 7.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 467 YVRILSTIDRELLKPSASVALHKHSNALVDVLA 565
+VR+L T++ L + S L K +++++D+LA
Sbjct: 117 WVRVLPTLENILYGSNLSSLLSKTTHSILDILA 149
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.4 bits (53), Expect = 7.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +2
Query: 362 EEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHK 535
EE Q P +GQ+ + + Q I Y++RI+ ++LK S + +HK
Sbjct: 212 EENLDFQESPHYLGQYKKLLSQAMDIF-----KPYFIRIIKQTTDQVLKDSKKMDVHK 264
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 9.2
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 239 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 418
ES+ TK+ E +EV ++Y++ E+ EYL QE + V V+ F A
Sbjct: 378 ESQSKTTKHSTSLPSTEPVEVDKQYMESEKIPTIDEYL--QEYSNEDEIVLQVLESFPAA 435
Query: 419 VDQNTGIVGSTTGSNYYVRIL--STIDREL 502
V +T + +T + Y R + S I R L
Sbjct: 436 VSFST--ITNTIQAKYSNRKIKNSNITRSL 463
>SPCC1183.05c |lig4||DNA ligase Lig4|Schizosaccharomyces pombe|chr
3|||Manual
Length = 923
Score = 25.0 bits (52), Expect = 9.2
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -2
Query: 195 ESVTWSSFSGKIIPISSIVSIAKRFRVLSDY--YLII*NVFYTETKCSRRSNLNIRT*LL 22
E VTW +IP S+ SI + S Y Y ++ ++ Y K + +L R +L
Sbjct: 355 EMVTWDPVLETVIPYGSLRSIFEDSSSHSSYSPYYVVFDILYLNGKSLVKYSLESRRRIL 414
>SPCC126.14 |prp18||U5 snRNP-associated protein
Prp18|Schizosaccharomyces pombe|chr 3|||Manual
Length = 343
Score = 25.0 bits (52), Expect = 9.2
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 299 VQEEYIKDEQRNLKKEYLHAQEEVK 373
+QE+ KDEQR LKK L +E +K
Sbjct: 41 LQEKQQKDEQRELKKRKLE-EERLK 64
>SPBC577.10 |||20S proteasome component beta 7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 262
Score = 25.0 bits (52), Expect = 9.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 263 YKKLQRMLEFLEVQEEYIKDEQRNLKKEYLH 355
Y+++QR+LE LE++E D L+ Y+H
Sbjct: 95 YQQIQRLLEKLEIKEGNYGDGYA-LQPSYIH 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,459,022
Number of Sequences: 5004
Number of extensions: 47615
Number of successful extensions: 163
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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