Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2017
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 199 2e-51
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 89 3e-18
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 62 4e-10
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 60 2e-09
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 60 2e-09
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 38 0.008
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 34 0.099
Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical p... 29 2.8
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 2.8
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 2.8
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.8
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.8
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.8
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.8
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 2.8
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 2.8
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 2.8
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 29 3.7
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 29 3.7
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical pr... 29 3.7
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 29 3.7
L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna polym... 29 3.7
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 29 3.7
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 4.9
Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.5
X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic int... 28 6.5
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr... 27 8.6
U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.6
U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical pr... 27 8.6
U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein. 27 8.6
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 27 8.6
AF025458-1|AAB70977.2| 384|Caenorhabditis elegans Hypothetical ... 27 8.6
AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical ... 27 8.6
AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical... 27 8.6
AC006608-3|AAF39757.1| 404|Caenorhabditis elegans Pyrophosphory... 27 8.6
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 199 bits (485), Expect = 2e-51
Identities = 99/133 (74%), Positives = 108/133 (81%)
Frame = +2
Query: 242 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAV 421
S D Y K L+R L L+V E+YIK E RNL+KE LHAQEEVKRIQSVPLVIGQFLEAV
Sbjct: 33 SSDDYIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAV 92
Query: 422 DQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQA 601
DQN IVGSTTGSNYYVR+LS +DRELLKP SVALHK+SNALVDVL ADSSI ML+
Sbjct: 93 DQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRP 152
Query: 602 DEKPDVQYSDIGG 640
DEKPD+ Y DIGG
Sbjct: 153 DEKPDISYGDIGG 165
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 88.6 bits (210), Expect = 3e-18
Identities = 39/129 (30%), Positives = 78/129 (60%), Gaps = 2/129 (1%)
Frame = +2
Query: 260 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVK--RIQSVPLVIGQFLEAVDQNT 433
K K +R+ ++L +++E+I++++R +E +E K ++ P+ +G E +D
Sbjct: 64 KLLKSERIKDYLLMEQEFIQNQERLKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQH 123
Query: 434 GIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQADEKP 613
IV + GS +YV I+S +D+E L+P SV L+ ++A++ VL+ D +S+++ ++ P
Sbjct: 124 AIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAP 183
Query: 614 DVQYSDIGG 640
Y+D+GG
Sbjct: 184 QETYADVGG 192
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 61.7 bits (143), Expect = 4e-10
Identities = 40/176 (22%), Positives = 84/176 (47%), Gaps = 18/176 (10%)
Frame = +2
Query: 167 PEKDDQVTDSKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKE 346
P KD + ++ + A + ++ +EDL ++ L + + + + I LK+
Sbjct: 6 PPKDGKNPEAMEVEDAIDEEILKMSTEDLKSRTHLLDNEIRIMRSEVQRINHSATTLKER 65
Query: 347 YLHAQEEVKRIQSVPLVIGQFLEAVD--QNT----------------GIVGSTTGSNYYV 472
E +K +++P ++ +E +D NT ++ ++T + Y++
Sbjct: 66 IKENTERIKVNKTLPYLVSNVVELLDLEDNTEEEGANVDLDAQKTKCAVIKTSTRATYFL 125
Query: 473 RILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQADEKPDVQYSDIGG 640
++ +D + LKP V ++K S +++ L + DS + ++ DE+P QYSDIGG
Sbjct: 126 PVVGLVDPDELKPGDLVGVNKDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGG 181
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/142 (22%), Positives = 75/142 (52%)
Frame = +2
Query: 215 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 394
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 6 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 64
Query: 395 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGA 574
++G+ L+ + + IV +T G Y V +I++E LK V+L + ++ L
Sbjct: 65 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 124
Query: 575 DSSISMLQADEKPDVQYSDIGG 640
D + + ++ ++ YSD+GG
Sbjct: 125 DPLVYKMSHEDPGNISYSDVGG 146
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/142 (22%), Positives = 75/142 (52%)
Frame = +2
Query: 215 GPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 394
GP ++ ++ L + +KL + +E + + ++ ++ + K++ ++ ++K +QSV
Sbjct: 14 GPAIVEDERTKALNSYRRKLAECRD-IEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQ 72
Query: 395 VIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGA 574
++G+ L+ + + IV +T G Y V +I++E LK V+L + ++ L
Sbjct: 73 IVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREV 132
Query: 575 DSSISMLQADEKPDVQYSDIGG 640
D + + ++ ++ YSD+GG
Sbjct: 133 DPLVYKMSHEDPGNISYSDVGG 154
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/128 (21%), Positives = 61/128 (47%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 436
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 31 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 90
Query: 437 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQADEKPD 616
+V + Y V + +++D L VAL + A+ +VL S D +S++ ++ PD
Sbjct: 91 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPD 150
Query: 617 VQYSDIGG 640
Y +GG
Sbjct: 151 STYEMVGG 158
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 52.8 bits (121), Expect = 2e-07
Identities = 28/128 (21%), Positives = 61/128 (47%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 436
TK ++ ++ + + + +Q+ L + +EE+ + +G+ +A+D+
Sbjct: 52 TKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 111
Query: 437 IVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLASGADSSISMLQADEKPD 616
+V + Y V + +++D L VAL + A+ +VL S D +S++ ++ PD
Sbjct: 112 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPD 171
Query: 617 VQYSDIGG 640
Y +GG
Sbjct: 172 STYEMVGG 179
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 47.6 bits (108), Expect = 7e-06
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 326 QRN-LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYVRILSTIDREL 502
QRN L + +EE++++ +G+ +A+D+ +V Y V + +ID
Sbjct: 58 QRNELNTKVRMLKEELQQLHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDVDKSIDINS 117
Query: 503 LKPSASVALHKHSNALVDVLASGADSSISMLQADEKPDVQYSDIGG 640
L A VAL S AL +L + D +S++ ++ PD Y +GG
Sbjct: 118 LNTGARVALRADSYALHKLLPNKVDPLVSLMMVEKVPDSTYEMVGG 163
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Frame = +2
Query: 269 KLQRMLEFLEVQEEYIKDEQ----RNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 436
K+ R+ ++L++++E+I + R L + Q+ V+ ++ P + + E D
Sbjct: 52 KMNRIHDYLQLEKEFITRQTSRHGRPLAVQKRREQQLVQSLRGTPTTLARVHELFDDEKH 111
Query: 437 IVGSTTGSN--YYVRILSTIDRELLKPSASVALHKHS------NALVDVLASGADSSISM 592
V GS +YV ILS +D++LL+ +A V + +A+V VL DS+
Sbjct: 112 AVVVVEGSRREWYVPILSIVDKDLLRLNALVMVKAGGMFKTVPSAIVGVLDDKIDSNAMG 171
Query: 593 LQADEKPDVQYSDIGG 640
+ ++ P + DIGG
Sbjct: 172 HKVEKTPKETFDDIGG 187
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +2
Query: 560 LASGADSSISMLQADEKPDVQYSDIGG 640
L + D +++M+Q +EKPDV YSD+GG
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGG 181
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 33.9 bits (74), Expect = 0.099
Identities = 23/87 (26%), Positives = 42/87 (48%)
Frame = +2
Query: 284 LEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSN 463
+E L + E I D + L + + +EE K+I+ + + ++ A +G+ G G N
Sbjct: 780 VECLRLLNEIISDFDQIL--DQILDREEFKKIEKIKTISTTYMVA----SGLAGRECGDN 833
Query: 464 YYVRILSTIDRELLKPSASVALHKHSN 544
+V ++ RELL S +H +N
Sbjct: 834 SHVEAIALFARELLVKLESTNIHSFNN 860
>Z81067-5|CAD92378.1| 965|Caenorhabditis elegans Hypothetical
protein F23A7.7 protein.
Length = 965
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -2
Query: 219 GPANAKPFESVTWSSFSGKIIPISSIVSIAKRFRVLS 109
G N F WS+F K + SI S+ RFR LS
Sbjct: 436 GNINTALFTKGKWSTFFPKSLNFGSIPSLPSRFRTLS 472
>Z75550-10|CAA99927.2| 444|Caenorhabditis elegans Hypothetical
protein T22C1.11 protein.
Length = 444
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 299 VQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 403
V+EE + E+ ++ KEY A + V +++ + LV+G
Sbjct: 216 VEEEVAQIEEEDVSKEYFDASKFVAQLEEMGLVLG 250
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 248 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 385
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 248 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 385
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 278 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 382
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 278 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 382
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 278 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 382
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 582 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 615
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 278 RMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 382
RM E ++ E + +E LK ++LH +EEV+R++
Sbjct: 822 RMNELTKIHE-MLMEEHDQLKVDHLHTEEEVERLK 855
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 248 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 385
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 248 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 385
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 248 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 385
++ K + + +++E EE DE N+K L QE+++R+Q+
Sbjct: 1418 EMIKKAQHIDQLMEMEPQLEELHPDELENIKAHRLAVQEQLQRLQA 1463
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 230 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 400
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 230 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 400
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 230 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 400
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 347 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 404
>U41010-5|AAV28334.1| 975|Caenorhabditis elegans Hypothetical
protein T05A12.4b protein.
Length = 975
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 387 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 283
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical
protein T05A12.4a protein.
Length = 1622
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 387 TDCMRFTSSCACKYSFFKFRCSSLMYSSCTSKNSN 283
++C + S+ C + F KF+ S CTS++ N
Sbjct: 389 SNCSQMCSAKICGWDFDKFKNEKFQCSKCTSESEN 423
>L12018-1|AAA65458.1| 518|Caenorhabditis elegans Polk (dna
polymerase kappa) homologprotein 1 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.7
Identities = 26/102 (25%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 260 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGI 439
++ + + LE L+++E +++ K Y H + R ++V + +F V+Q TG+
Sbjct: 214 RFDENENTLEDLKIEESICPKCEKSRKIYYDHVEFGTGREEAVREI--RF--RVEQLTGL 269
Query: 440 VGST-TGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVL 562
S SN+ +L+ I +L KP+ L NA+++ L
Sbjct: 270 TCSAGIASNF---MLAKICSDLNKPNGQYVLENDKNAIMEFL 308
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 230 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQ--RNLKKEYLHAQEEVKRIQSVPLVI 400
DEL SE++ + + L R + ++QE+ K E+ + LK++ + + E + VP+ +
Sbjct: 365 DELNSENMILRDENLSRQMVSEKMQEQITKHEEEIKTLKQKLMEKENEQEE-DDVPMAM 422
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +2
Query: 233 ELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKK--EYLHAQEEVKRIQ 382
E E+E+ K ++ +E ++ +EE +K E+ +KK E L A+EE +++
Sbjct: 889 EKEAEEENEKLIPERKRMEAIKEEEERVKAEREKVKKEEERLKAEEEKVKVE 940
>Z81140-2|CAB03486.1| 581|Caenorhabditis elegans Hypothetical
protein W10G6.3 protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 230 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 382
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 266 KKLQRMLEFLEVQEEYIKDEQR---NLKKEYLHAQEEVKRIQS 385
KKLQ + + +EVQ+E IK+ + NL+K + E+K +S
Sbjct: 324 KKLQELRDEVEVQDEEIKESRADVDNLRKIVNDLKHEIKMSES 366
>X70835-1|CAA50183.1| 581|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +2
Query: 230 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 382
D L+ +DL L+ + L+ + +++E LKKE E++R++
Sbjct: 170 DRLKIDDLLVTLSNLEAEINLLKRRIALLEEEVARLKKENFRLTSELQRVR 220
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical
protein C31E10.8 protein.
Length = 1272
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = +2
Query: 224 SFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRI----QSVP 391
+FDE ++ + L +E +Q +Y+ L+K+ A E VK I +
Sbjct: 613 AFDEEAIVNMAFRIPNLPTRIELKNMQLQYVNLLAERLEKKMRRANEFVKSIANNLTNEK 672
Query: 392 LVIGQFLEAVDQNTGIVGS 448
L+ F++ NTG + S
Sbjct: 673 LISNIFIDTFTPNTGFIVS 691
>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
protein E01G6.1 protein.
Length = 1391
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -2
Query: 408 NCPMTRGTDCMRFTSSCACKYSFFKFRCSSLMYSSC 301
N M+RG C T Y K +CS +Y+ C
Sbjct: 467 NANMSRGNGCKGSTQRSMWFYDKSKKKCSQFVYNGC 502
>U80023-2|AAG24035.1| 204|Caenorhabditis elegans Hypothetical
protein F07C4.6 protein.
Length = 204
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -2
Query: 444 PTMPVF*STASRNCPMTRGTDCMRFTSSCACKYSFFKFRCSSLMYSSCTS 295
PT + A +CP T G C T SC F + C+S+ + C S
Sbjct: 88 PTSKDAKTAAIAHCPKTCGLCCQTSTYSCQ-NAPFPRLNCASVTKAMCLS 136
>U55854-8|AAK68159.1| 131|Caenorhabditis elegans Hypothetical
protein C04G6.11 protein.
Length = 131
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 421 NCLKKLSNDKRNRLYALYFFLCMQIFFLQVSLFIFNVLFL 302
+CLKK S + + FF C+ FFL S+F + +L
Sbjct: 89 DCLKK-SRRRLLSIKFFVFFFCLLPFFLSSSIFFLYLFYL 127
>U14521-1|AAA64269.1| 360|Caenorhabditis elegans ppp-1 protein.
Length = 360
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 94 NQIIIR*YTKSLSYRNNGRDWNYFT 168
N+ I + +T+ + YR NG+++NY T
Sbjct: 274 NKAIQKSFTRLMEYRGNGKNFNYKT 298
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 27.5 bits (58), Expect = 8.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Frame = +2
Query: 107 SDSTRNLLAIETMEEIGIILPEKDDQVTDSKGLAFAGPQSFDELE---SED--LYTKYKK 271
S+ T+ ++ I +E L ++ +VT + LA Q +LE +ED + KK
Sbjct: 527 SEKTQLVVRISELETEMNKLRQEGKKVTTAAKLAEERRQKLKDLERQHAEDKKVLNDMKK 586
Query: 272 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 367
LQ +E + +DE +NLK + L E
Sbjct: 587 LQETRRRMEETLKKTEDELKNLKTQRLRLLRE 618
>AF025458-1|AAB70977.2| 384|Caenorhabditis elegans Hypothetical
protein C01B12.4 protein.
Length = 384
Score = 27.5 bits (58), Expect = 8.6
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 415 LKKLSNDK-RNRLYALYFFLCMQIFFLQVSLFIFN-VLFLY 299
LK +SN++ RN +YAL F + F V +FI +FLY
Sbjct: 59 LKYVSNERIRNDMYALIFMFPITTFASLVGMFIPRAAIFLY 99
>AF024492-4|AAF98617.1| 848|Caenorhabditis elegans Hypothetical
protein F14F9.3 protein.
Length = 848
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/65 (21%), Positives = 35/65 (53%)
Frame = +2
Query: 224 SFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIG 403
+F+ +E E L TKY L + EFL+ + +++ K + ++++++++ +I
Sbjct: 252 AFEVIEKEKLVTKYTSLLNIQEFLKTEGYTLENADIIFKNMEVKFEKQMEQLREDETLIT 311
Query: 404 QFLEA 418
+ L +
Sbjct: 312 KRLRS 316
>AF016452-18|AAB66009.1| 405|Caenorhabditis elegans Hypothetical
protein T05H4.2 protein.
Length = 405
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 194 SKGLAFAGPQSFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLK 340
S GL G ELE ED YKK + +++ + E +KD R LK
Sbjct: 154 SVGLKTNGGYVTYELEDEDCQVNYKKRKMIVKDKKPLEVAMKDVSRLLK 202
>AC006608-3|AAF39757.1| 404|Caenorhabditis elegans
Pyrophosphorylase family protein 1 protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 94 NQIIIR*YTKSLSYRNNGRDWNYFT 168
N+ I + +T+ + YR NG+++NY T
Sbjct: 274 NKAIQKSFTRLMEYRGNGKNFNYKT 298
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,439,374
Number of Sequences: 27780
Number of extensions: 263732
Number of successful extensions: 992
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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