Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-2017
(640 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 28 0.088
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 27 0.15
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 27 0.15
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 27 0.15
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 27 0.15
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 27 0.15
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 27 0.15
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 27 0.15
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 27 0.15
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 27 0.15
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 27 0.15
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 27 0.15
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 27 0.15
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 27 0.15
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 27 0.15
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 27 0.15
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.27
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.27
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 26 0.27
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 26 0.27
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 26 0.27
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 26 0.27
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 26 0.27
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 26 0.27
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 25 0.62
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 25 0.82
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 25 0.82
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 4.4
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 22 5.8
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 22 5.8
AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase prec... 22 5.8
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.6
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 7.6
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.088
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYEIRRIREI 72
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 27.1 bits (57), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ QR +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREAWLIQQEREREHQRLMKKMIL--EYELRRIREI 72
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 26.2 bits (55), Expect = 0.27
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 257 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV 388
TK ++LQ E +Q+E ++ +R +KK L + E++RI+ +
Sbjct: 31 TKEERLQHRREVWLIQQEREREHERLMKKMIL--EYELRRIREI 72
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 25.0 bits (52), Expect = 0.62
Identities = 10/47 (21%), Positives = 26/47 (55%)
Frame = +2
Query: 272 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFL 412
L+ + + E + +K +RN+K + + E K +++ +++G F+
Sbjct: 421 LRELTQVTEEKPRVMKMGKRNIKAQVKRFRMETKAAKTLGIIVGGFI 467
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 24.6 bits (51), Expect = 0.82
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 254 YTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLH 355
+ +YKKLQ E+Q +K E N+ K Y +
Sbjct: 431 FLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTY 464
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 24.6 bits (51), Expect = 0.82
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 254 YTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLH 355
+ +YKKLQ E+Q +K E N+ K Y +
Sbjct: 431 FLRYKKLQPQYSQSELQMPGVKFESVNIDKLYTY 464
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 242 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 364
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 242 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 364
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 242 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 364
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.4
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 242 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE 364
S D +Y+K R E L +EE + E+R +K Y ++E
Sbjct: 5 SRDRNREYRKKDRQYEKLCNEEEKLL-EERTSRKRYSRSRE 44
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.2 bits (45), Expect = 4.4
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1
Query: 436 HSWQHHWLKLL 468
H+W H WL LL
Sbjct: 540 HTWIHPWLPLL 550
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 351 KYSFFKFRCSSLMYSSCTSKNSNILWSFLYFVY 253
KY F K+ T KN W + Y++Y
Sbjct: 147 KYEFSKYDKLKKKLEEWTGKNITTPWDY-YYIY 178
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 351 KYSFFKFRCSSLMYSSCTSKNSNILWSFLYFVY 253
KY F K+ T KN W + Y++Y
Sbjct: 162 KYEFSKYDKLKKKLEEWTGKNITTPWDY-YYIY 193
>AF205594-1|AAQ13840.1| 156|Apis mellifera acid phosphatase
precursor protein.
Length = 156
Score = 21.8 bits (44), Expect = 5.8
Identities = 10/33 (30%), Positives = 14/33 (42%)
Frame = -2
Query: 351 KYSFFKFRCSSLMYSSCTSKNSNILWSFLYFVY 253
KY F K+ T KN W + Y++Y
Sbjct: 50 KYEFSKYDKLKKKLEEWTGKNITTPWDY-YYIY 81
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.4 bits (43), Expect = 7.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -2
Query: 372 FTSSCACKYSFFKFRCSSLMYS 307
+T+ C +YS F C ++++
Sbjct: 187 YTTDCTIEYSTGNFTCIQIVFN 208
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.4 bits (43), Expect = 7.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +2
Query: 311 YIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFL 412
Y ++ K+E A++E K +++ +V+G FL
Sbjct: 596 YKANKASKKKREKSSAKKERKATKTLAIVLGVFL 629
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 7.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 427 LINCLKKLSNDKRNRLYALYFF 362
LINC L +RNRL L F
Sbjct: 281 LINCSDILEEFERNRLQLLESF 302
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,620
Number of Sequences: 438
Number of extensions: 3755
Number of successful extensions: 38
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -